Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0854 ATGATTCAACCTCAAACCCATTTAAATGTAGCCGACAACAGCGGAGCCCGCAAATTGATTAATTGGAGATATGCTTATATTGGTGACATTGTTGTTGTTGTAATAAAGGAAGCTGTACCAAATACGCCTTTTGAAATATCAGAAGTGATCAGAGCTGTAATTGTACGTACTTTTAAAGAACTCAAACGCTTCAACGGTATCATAATACACTATAATGATAATGCTACGGTTGTAACGACCCAATTTCATTACTAG 255 0.3608 MIQPQTHLNVADNSGARKLINWRYAYIGDIVVVVIKEAVPNTPFEISEVIRAVIVRTFKELKRFNGIIIHYNDNATVVTTQFHY 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0854 84 SMART Ribosomal_L14_2 1 83 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lal21g0854 84 SUPERFAMILY Ribosomal protein L14 1 79 IPR036853 GO:0003735|GO:0005840|GO:0006412
Lal21g0854 84 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 81 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lal21g0854 84 Gene3D Ribosomal protein L14 1 82 IPR036853 GO:0003735|GO:0005840|GO:0006412
Lal21g0854 84 PANTHER RIBOSOMAL PROTEIN L14B/L23E-RELATED 1 81 - -
Lal21g0854 84 Pfam Ribosomal protein L14p/L23e 1 80 IPR000218 GO:0003735|GO:0005840|GO:0006412
Lal21g0854 84 ProSitePatterns Ribosomal protein L14 signature. 52 78 IPR019972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0854 Lal-Chr21 7792230 7792508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0854 8 78 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 33.735 8.17e-08 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0854 K02874 - cpap:5878436 119.398