Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0839 ATGGAACCCGTGGATATCGTTGGAAAAGCAAAGGAAGACGCTTCTCTTCCTAAAGCAACAATGACGAAAATTATTAAAGAGATGTTGCCCCCAGATGTCCGTGTTGCAAGAGATACTCAAGATCTACTAATCGAGTGTTGCATAGAGTTTATAAACCTCCTCTCATCAGAGTCCAATGAAGTCTGTAGCAAGGAGGAAAGAAGGACGATTGCACCTGAACATGTACTGAAGGCTTTAGGGGGGCTTGGATTTGGTGATTACATTGAGGAAGTTTATGCAGCATATGAACAGCACAAACTGGAGACAATGGACTCTCTAAAAGGTGCTAAGTGGAGCAACAGAGCTGAGATGACTGAGGAAGAAGCATTAGTAGAGCAGCAAAGGATGTTTGCTGAGGCACGTGCTAGAATGAATGGTGGGGAAATTGCTTCTAAGCAGCCAGATGCTGACCAAAATTTAGAGAGCTAA 468 0.4359 MEPVDIVGKAKEDASLPKATMTKIIKEMLPPDVRVARDTQDLLIECCIEFINLLSSESNEVCSKEERRTIAPEHVLKALGGLGFGDYIEEVYAAYEQHKLETMDSLKGAKWSNRAEMTEEEALVEQQRMFAEARARMNGGEIASKQPDADQNLES 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0839 155 PANTHER PROTEIN DR1 HOMOLOG 1 154 IPR044255 -
Lal21g0839 155 SUPERFAMILY Histone-fold 12 141 IPR009072 GO:0046982
Lal21g0839 155 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Lal21g0839 155 Gene3D Histone, subunit A 6 143 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0839 Lal-Chr21 7666448 7670705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0839 1 148 CCAAT-DR1 Transcription Factor Family AT5G23090 78.523 2.28e-84 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lal21g0839 CBFD_NFYB_HMF 1.5e-20 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0839 K21751 - gmx:547635 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0839 21 7666448 7670705 Lal21g0839 21 7666448 7670705 ECH