Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0836 ATGGGGTGTTCGTTATCTGGTCTAAGCTCGTTATACGACGCCGTTAATGGAGGAGGAGAAGTTTGGATAAACGAGAACAGGTTTCGCATTGTGAGGCAGATCGGAGAAGGTGGCTTCGCTTATGTGTATTTGGTGAAGGAGCTCGTCACTGACACTGATGCCACCGTTGGTATTTCCAACAAATTCAAATACTCTTCCCATCTCTCAGGTGATGGAACTTACGCTATCAAAAAGATACTCATTCATAACAGTGAGCAGTTGGAGTTGGTGAGGGAAGAGATCCGTGTTTCATCGTTGTTCAGTCATCCAAATCTGCTCCCACTTCTTGATCATGCAATCATTTCACCTACCCAAGAAACATGGAATCATGAAGCATACTTGTTATTTCCAGTTTACTTGGATGGAACGTTGCTAGACAATACAAAAACAATGATGGCCAATAAGGAGTTCTATTCTACCTCAGATGTTCTTCAAATATTTTGGCAGATATGTCAAGGACTCAAACATATGCACAGTTTAGATCCTCCATATGCACATAATGATGTCAAACCTGGTAATGTTCTCATAACACATAGAAACGGACAACCACCTCTTGCTATACTGATGGATTTTGGCAGTGCTCGACCTGCCAGGAGGCAAATTCGCTCCCGATCAGAGGCACTGCAATTGCAGGAATGGGCATCTGAGCATTGCTCTGCTCCTTTCCGAGCTCCTGAGTTGTGGGATTGCCCAAGTCATGCTGATATAGATGAGAGGACTGATATTTGGTCACTAGGCTGCACGTTATACGCCATAATGTATGGTGTATCACCATTTGAATATGCACTCGGAGATTCTGGCGGAAGCCTACAACTGGCCATTATAAATGCTCAGGTCAAATGGCCAGCGGGACCTAAGCCTCCATATCCGGAAGCTCTTCGTCATTTTGTGACATGGATGCTTCAGCCCCAACCTACTATGCGGCCTAGAATAGATGATATCATTATCCATGCTGAGAAGTTGATTGCAAAATCCTCCGCTTGA 1023 0.4438 MGCSLSGLSSLYDAVNGGGEVWINENRFRIVRQIGEGGFAYVYLVKELVTDTDATVGISNKFKYSSHLSGDGTYAIKKILIHNSEQLELVREEIRVSSLFSHPNLLPLLDHAIISPTQETWNHEAYLLFPVYLDGTLLDNTKTMMANKEFYSTSDVLQIFWQICQGLKHMHSLDPPYAHNDVKPGNVLITHRNGQPPLAILMDFGSARPARRQIRSRSEALQLQEWASEHCSAPFRAPELWDCPSHADIDERTDIWSLGCTLYAIMYGVSPFEYALGDSGGSLQLAIINAQVKWPAGPKPPYPEALRHFVTWMLQPQPTMRPRIDDIIIHAEKLIAKSSA 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0836 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Lal21g0836 340 ProSiteProfiles Protein kinase domain profile. 28 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0836 340 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 339 - -
Lal21g0836 340 SUPERFAMILY Protein kinase-like (PK-like) 21 330 IPR011009 -
Lal21g0836 340 Gene3D Transferase(Phosphotransferase) domain 1 15 340 - -
Lal21g0836 340 CDD STKc_16 27 336 - -
Lal21g0836 340 Pfam Protein kinase domain 70 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0836 340 PANTHER - 1 339 - -
Lal21g0836 340 SMART serkin_6 28 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0836 Lal-Chr21 7568624 7576970 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0836 33 330 EF-hand Containing Proteins AT4G04710 25.407 1.13e-16 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Lal21g0836 Pkinase 2.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0836 K08856 - gmx:100810160 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0836 21 7568624 7576970 Lal21g0836 21 7568624 7576970 ECH