Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0811 ATGGAAGCCATGGCTAGGGAGAAGATGACGATGTCGCGGGTTTTCTTCAACGGTGAAAGCGGCGGCGAGAAGCCCCAATGGCGGTTCTGCCGTGAAGAGGTGCTCTCCGGCGGCGATGGCAACGGTGAACGGAGCAGTGGCGTTTTCGTGCCGGCGAAGCATAAGGACGAGCACTCATGGTGGTTATTTCTCGCCGATGAAGAGGCGATGAATTTTGTTGCCATGCCATCTATATCAAGTTCTTCTGGTCTTCATGAACCAATTATTAGTGCAATCACAATTTGTAAGCATAAGAAAGGAGAGGAAGATGAGAGTCTAAGACGTTTGCCTAAGTGTCATCATGCTTTTCATTTACCTTGTATTGATACTTGGCTTCCATCTCATACCAATTGTCCTATGTGTAGAGCTCCAATTGTTACCAACCCTACAAGGATTCCATCTCTTGTGCCTAATAATGCTGTTGTTGATCCAACTTCATTGGAAAATAGTGCTCCTCATACCCCTCAAGGACTTGAACTTAGGAATGGTTCAGAAGAAGAAGGAGAATTGGAAGTTCAAGATGAGACAAGGGTATGTGAAACTGAAAGTCTTGTGGTGAATATAAGACCAAGAAGATCTGTTTCTTTGGATTCATCTTCTGTTGCAAATATCAATCTTGCTCTTGAAAATGTTCAATCATCAGTTCAAAGTGGTGAAAATGAAGGGATTGTTTCAAAGAGGTTTATTGCTGGAAATGAGAATTTTCCAACTACGTCCAATTCCAAAAGAAGCTCATCTTTTAGGACATGA 789 0.4297 MEAMAREKMTMSRVFFNGESGGEKPQWRFCREEVLSGGDGNGERSSGVFVPAKHKDEHSWWLFLADEEAMNFVAMPSISSSSGLHEPIISAITICKHKKGEEDESLRRLPKCHHAFHLPCIDTWLPSHTNCPMCRAPIVTNPTRIPSLVPNNAVVDPTSLENSAPHTPQGLELRNGSEEEGELEVQDETRVCETESLVVNIRPRRSVSLDSSSVANINLALENVQSSVQSGENEGIVSKRFIAGNENFPTTSNSKRSSSFRT 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0811 262 ProSiteProfiles Zinc finger RING-type profile. 94 135 IPR001841 -
Lal21g0811 262 SUPERFAMILY RING/U-box 94 143 - -
Lal21g0811 262 MobiDBLite consensus disorder prediction 159 178 - -
Lal21g0811 262 Pfam RING-H2 zinc finger domain 95 135 IPR024766 GO:0008270
Lal21g0811 262 SMART ring_2 93 134 IPR001841 -
Lal21g0811 262 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 82 254 IPR044675 -
Lal21g0811 262 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 142 IPR013083 -
Lal21g0811 262 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 82 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0811 Lal-Chr21 7203096 7205083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0811 83 236 C3H Transcription Factor Family AT5G17600 36.364 1.99e-23 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0811 - - lja:Lj6g3v2193690.1 172.555