Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0773 ATGGCTTCTTATACTTCCATCTCTCTTTGTCCTTACAGTCTCTGCTTCCGCTTAAAGGCAAGTAGGCTTCCCGTTTCTTGTTCCGTTGCTTCTTCTCAGCTCCGAGGTACTGATGGATCTAATTGTAAAGTACCCCGCAAAAGAACAAGAAAAATAGAAGGTCCTCGAAAAAGCATGGAAGACTCTGTTCAACGCAAGATGGAGCAATTTTATGAAGGATCAGATGGGCCACCCCTCCGTGTTCTTCCTATTGGGGGGTTGGGTGAAATTGGAATGAATTGCATGCTTGTTGGTAACCATGACCGCTATATCCTCATTGATGCTGGTGTCATGTTTCCAGACTATGATGAACTTGGAGTTCAAAAGATCATACCTGATACAACATTTATAAGAAAATGGAGCCACAAAATTGAAGCCCTTATTATAACACATGGTCACGAAGACCATATTGGTGCTTTGCCCTGGGTCATCCCTGCATTGGATTCCAATACACCAATTTTTGCATCTTCCTTTACTATGGAGCTTATAAAAAAACGTTTGAAGGAGCATGGTATTTTTATTCCATCTAGACTGAAAACATTTAGAACAAGGATGAAGTTTATGGCTGGCCCATTTGAGATAGAACCTATCAGGGTGACCCATTCTATTCCTGATTGTTGTGGATTAGTTCTTCGCTGCTCTGATGGTACTATTCTTCATACTGGGGACTGGAAGATTGATGAGACACCACTAGATGGGAATGTTTTTGATCGTGAAGCTTTGGAGGAACTCTCTAAAGAAGGAGTAACATTGATGATGAGTGATTCGACAAATATACTTTCGCCTGGAAGGACAACCAGTGAATCTGTTGTGGCAGAAGCATTATTGAGGCACATTTCTGCTTCTGAAGGAAGGGTTATAACAACCCAATTTGCTTCAAATATACATCGGCTTGGAAGTGTGAAAGCTGCTGCTGATTTAACTGGCAGAAAGTTGGTTTTTGTTGGCATGTCTTTAAGAACATATTTAGAAGCTGCTTGGAAGGATGGAAAGGCTCCCATTGATCCATCCACTCTGGTGAAAGCTGAGGATATTGATGCTTATGCTCCAAAGGATCTGCTAATTGTAACAACAGGATCTCAAGCAGAGCCACGTGCCGCCTTGAATCTTGCATCCTACGGAAGTAGCCATGCTTTCAAATTATCTAAGGAAGATGTTGTTTTGTATTCAGCGAAGGTTATCCCTGGAAATGAGTCTCGCGTAATGCAAATGCTAAACCGCATATCGGAAATAGGATCAACAATAGTTATGGGGAAAAATGAAGGTCTACACACATCTGGTCATGCATATCGTGGAGAATTGGAGGAAGTACTTAGAATAGTGAAGCCACAACATTTTCTTCCCATACATGGAGAACTATTGTTCTTGAAGGAGCATGAATCACTTGGAAAATCAACTGGCATTCGACACACTGCTGTTATTAAGAATGGAGAGATGCTTGGTGTTTCGCACTTGAGAAATAGAAGAGTCCTTTCAAATGGTTTCATTTCCCTTGGAAAAGAGAATTTACAGTTGAAGTATAGTGATGGCGACAAAGCATTTGGTACATCAAGTGAACTCTGCATTGATGAAAGATTGAGAGTTGCATTAGACGGGATCATTGTGGTTAGCATGGAAATATTTCGCCCTCAGAATTTAGATAGTTTGGCTGGAAACACCTTAAAAGGGAAGATAAGAATTACCACAAGATGCTTGTGGCTTGACAAAGGGAAGTTGCTGGATGGACTCCATAAAGCTGCTCATGCAGCTCTTTCAAGCTGCCCTGTAAACTGTCCACTGACTCACATGGAAAGAAATGTATCTGAGGTGTTGAGGAAGTTGGTGAGGAAGTACAGTGGTAAAAGACCAGAAGTTATTGCTATTGCCATTGAAAATCCTGCAGCTGTTCTTGCAGATGAGATAAACACAAAGTTGTCTGGCAAATCCCATGTGGGTCATGGTATATCAACATTAAGAAAAGCGGTGGATGGAGATGGGAAGGCAAATCAGTCTACCACAATGCAAATAAGAGGTAACACCAATGAATTTGAAGAGAACATAGAGAATGGTGTAGATGATGGCATTGATGTCGAAGGGAAAAATACCACTACTTCAAGTGGAGCTGAGGGTGATTTATTTGATTCAGAGGATTCAGGTGTATTTTTGAAAACATTCATTGCATCCTCACCAGTTGAGAAGTCAACTAATGCTAGCAATGGTTATGTTACACAAAGGGAGCATGAGTCCAATCTGAAGGAAGATTCTTCCGAAGACACTGATGATGCCCAGTCTGAAGAAATGTCTAATTCTGAACCTAAGTCTGAAGAGAAGTCTAATTCTGAACTCAAGTCTGAAGAGAAGTCTAATTCTGAACCCAAGTCTGAAGAGACATCTAATTCTGAACCCAAGTCTTCAAAACCAGTGAAGAGAAATAAATGGAAACCTGAGGAAGTTAAGAAGGTGATTGGTATGCGTGAGGAATTACATGACAGATTTCAAATCGTTAAGGGAAGGATGACTCTCTGGGAAGAGATATCTCAGACCTTATTGACTGATGGGATCAGCAGAAGTGCTGGACAATGCAAATCTCTGTGGACATCTTTGGTACTGAAATATGAGGAGCTCAAGAATGAGAAGGGTAGCAAGAAAAGTTGGCAATACTTTGAGGACATGGAAAGGATAATGTCTAATGGCCATGCCCGGGCAACAAAATAA 2733 0.4109 MASYTSISLCPYSLCFRLKASRLPVSCSVASSQLRGTDGSNCKVPRKRTRKIEGPRKSMEDSVQRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWSHKIEALIITHGHEDHIGALPWVIPALDSNTPIFASSFTMELIKKRLKEHGIFIPSRLKTFRTRMKFMAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGNVFDREALEELSKEGVTLMMSDSTNILSPGRTTSESVVAEALLRHISASEGRVITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDGKAPIDPSTLVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHAFKLSKEDVVLYSAKVIPGNESRVMQMLNRISEIGSTIVMGKNEGLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHESLGKSTGIRHTAVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQLKYSDGDKAFGTSSELCIDERLRVALDGIIVVSMEIFRPQNLDSLAGNTLKGKIRITTRCLWLDKGKLLDGLHKAAHAALSSCPVNCPLTHMERNVSEVLRKLVRKYSGKRPEVIAIAIENPAAVLADEINTKLSGKSHVGHGISTLRKAVDGDGKANQSTTMQIRGNTNEFEENIENGVDDGIDVEGKNTTTSSGAEGDLFDSEDSGVFLKTFIASSPVEKSTNASNGYVTQREHESNLKEDSSEDTDDAQSEEMSNSEPKSEEKSNSELKSEEKSNSEPKSEETSNSEPKSSKPVKRNKWKPEEVKKVIGMREELHDRFQIVKGRMTLWEEISQTLLTDGISRSAGQCKSLWTSLVLKYEELKNEKGSKKSWQYFEDMERIMSNGHARATK 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0773 910 MobiDBLite consensus disorder prediction 672 691 - -
Lal21g0773 910 Pfam Beta-lactamase superfamily domain 102 238 IPR001279 -
Lal21g0773 910 PANTHER RIBONUCLEASE J 786 910 - -
Lal21g0773 910 PANTHER RIBONUCLEASE J 1 786 - -
Lal21g0773 910 CDD GT1 817 882 - -
Lal21g0773 910 MobiDBLite consensus disorder prediction 772 818 - -
Lal21g0773 910 ProSiteProfiles Myb-like domain profile. 811 875 IPR001005 -
Lal21g0773 910 CDD RNaseJ_MBL-fold 82 493 - -
Lal21g0773 910 Gene3D - 83 495 IPR036866 -
Lal21g0773 910 Gene3D - 819 880 - -
Lal21g0773 910 Pfam Myb/SANT-like DNA-binding domain 816 900 IPR044822 -
Lal21g0773 910 MobiDBLite consensus disorder prediction 738 818 - -
Lal21g0773 910 SUPERFAMILY Metallo-hydrolase/oxidoreductase 79 493 IPR036866 -
Lal21g0773 910 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 436 481 IPR011108 -
Lal21g0773 910 SMART Lactamase_B_5a 91 288 IPR001279 -
Lal21g0773 910 MobiDBLite consensus disorder prediction 41 57 - -
Lal21g0773 910 MobiDBLite consensus disorder prediction 669 721 - -
Lal21g0773 910 MobiDBLite consensus disorder prediction 38 57 - -
Lal21g0773 910 PANTHER RNA-METABOLISING METALLO-BETA-LACTAMASE 1 786 - -
Lal21g0773 910 PANTHER RNA-METABOLISING METALLO-BETA-LACTAMASE 786 910 - -
Lal21g0773 910 Gene3D - 280 430 IPR042173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0773 Lal-Chr21 6511679 6528974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0773 818 878 Trihelix Transcription Factor Family AT5G01380 40.984 4.04e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal21g0773 Lactamase_B_2 5.5e-10 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0773 - - lang:109326906 1529.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0773 21 6511679 6528974 Lal21g0773 21 6511679 6528974 ECH
Lal21g0773 21 6511679 6528974 Lal4g0731 4 6081215 6093820 LSH