Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0772 ATGGCCAATCATTCCCAAACACACCCTAACCACACCATCGACCCAAACAGTGGTTTTTGCTCCCAAACAAGAACATTCCACAGCCTCCGTCCAAATATCCCTCTTCCTCCACCCTCTCAACCACTCTCTCTCACCGACTACACCCTCTCTCTCCTCCCCTCCACCGCTGCCACTGCCACCGTCCTCATCGACTCCACCACCGACACCCACCTCTCCTACGCCCTCTTCCTCCGCCAGATTAAATCCCTCACTTCCTCCCTCCAATCCTCATTCCCTTCTCTTTCAAAAGGCCACGTGGCACTCATCCTCACCCCTTCTTCCCTGCATGTCCCCGTACTCTATTTCTCTCTCCTCTCCCTTGGTGTTGTTATAGCTCCCGCTAACCCGCTCAGTTCCGATTCCGAGTTGACTCACCTGGTTCAACTCACTAAACCCGTCATCGCTTTCGCAACTTCATCAATCGCAAATCACATTCCGAATCTCAAATTCGGCACTGTTGTAATCGACTCACCTCGATTCATTTCATTGCTTAACAACTTCAATGACAATTCGGAACTACGCCGAGTCGAACTGAGTCAGTCCGACTCGGCCGCGATTCTCTTCTCTTCCGGGACCACCGGCCGAGTCAAGGGAGTGGAACTCACTCACCGGAATTTCATCGCATTAATCGGAGAATTCTACCACATCAAGCACGTGACAGAAGGTCAAAATGAGGAAGAGATGCAGCCGGTGTCGCTGTTCACGCTTCCACTGTTCCACGTGTTCGGGTTCTTCATGCTGGTGAGGGCAATAGCGATGGGAGAGACGTTGGTGTTTATGCAGAGGTTCGATTTGGAAGGGATGTTGAAGACGGTGGAGAGATACGGAATCAGCTACATGCCGGTGTCGCCGCCGCTTGTGGTGGCGCTGGCGAAGTCGGAGCTTGTGAATAAATACGATGTTAGCTCGCTGAAGTTGCTGGGATGCGGTGGCGCGCCGCTTGGGAAGGAGGTGGCGGAAAGCTTCAGTGCTAGATTTCCTAATACTGAAATTGTGCAGGGATATGGTCTGACTGAAAGTGGAGGAGCGGCAACAAGAATGGTAGGGGCTGATGAGGCTAAGCGGCATGGTTCAGTAGGTCGACTAGCAGAAAGTATGGTGGCCAAGATAGTGGACCCTATAACAGGAGAAGCATTATCCCCTGGCCAAAAAGGAGAACTGTGGTTGAAAGGTCCAACAATCATGAAAGGTTATGTAGGAGATGAAAAAGCAACCGTTCAAACATTGGATTCAGAGGGATGGCTGAAGACCGGTGATCTTTGTTATTTTGACTCTGATGGTTTCCTTTACATTGTAGATAGACTGAAGGAATTGATTAAATACAAAGCTTATCAGGTTCCCCCAGCTGAATTGGAACATTTACTTCACACCAATCCTGAAATTGCCGATGCTGCAGTAATTCCGTATCCTGATGAAGATGCAGGGCAGATTCCAATGGCCTTTGTGGTAAGAAAGCCTGGAAGCAACATCACTGCAGCTCAGGTCATGGAGTTTGTTGCAAAGCAGGTATCACCATACAAAAAGATACGACGAGTTTCTTTTATTAACTCTATCCCAAAATCCCCAGCAGGCAAAATTTTGAGAAGAGAATTAGTTAATTATGCTCAATCTAGTGCTTCTTCCAAATTGTGA 1671 0.4883 MANHSQTHPNHTIDPNSGFCSQTRTFHSLRPNIPLPPPSQPLSLTDYTLSLLPSTAATATVLIDSTTDTHLSYALFLRQIKSLTSSLQSSFPSLSKGHVALILTPSSLHVPVLYFSLLSLGVVIAPANPLSSDSELTHLVQLTKPVIAFATSSIANHIPNLKFGTVVIDSPRFISLLNNFNDNSELRRVELSQSDSAAILFSSGTTGRVKGVELTHRNFIALIGEFYHIKHVTEGQNEEEMQPVSLFTLPLFHVFGFFMLVRAIAMGETLVFMQRFDLEGMLKTVERYGISYMPVSPPLVVALAKSELVNKYDVSSLKLLGCGGAPLGKEVAESFSARFPNTEIVQGYGLTESGGAATRMVGADEAKRHGSVGRLAESMVAKIVDPITGEALSPGQKGELWLKGPTIMKGYVGDEKATVQTLDSEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHLLHTNPEIADAAVIPYPDEDAGQIPMAFVVRKPGSNITAAQVMEFVAKQVSPYKKIRRVSFINSIPKSPAGKILRRELVNYAQSSASSKL 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0772 556 Pfam AMP-binding enzyme C-terminal domain 463 538 IPR025110 -
Lal21g0772 556 ProSitePatterns Putative AMP-binding domain signature. 199 210 IPR020845 -
Lal21g0772 556 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 26 545 - -
Lal21g0772 556 Gene3D - 27 449 IPR042099 -
Lal21g0772 556 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 26 545 - -
Lal21g0772 556 Gene3D - 450 553 IPR045851 -
Lal21g0772 556 SUPERFAMILY Acetyl-CoA synthetase-like 59 550 - -
Lal21g0772 556 Pfam AMP-binding enzyme 58 454 IPR000873 -
Lal21g0772 556 CDD 4CL 50 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0772 Lal-Chr21 6506008 6511203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0772 5 556 Monolignol Biosynthesis Gene Families AT5G63380 58.761 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0772 K01904 - gmx:100777435 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0859 17 6529096 6533598 Lal21g0772 21 6506008 6511203 LSH