Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0757 ATGGCTTCCAAAAGCCATCACCTCTGTCTCTTTACACTATTTTCACTATTTTCCCACTTTTCATTTACCACTCATGCCAACCTTTATCTACACCCTTTAGACCTCAATGCTCTCACAACTCTCCATAAGGACCTTAAAATCAAGGGTCAACTTCAGAGACACACAACACACCCTTGTAACATAGATGGTGTTTTCTGTGAGAAGAGGCTCTCCAACAAAGAAAGTTATGTCCTTAGAATCACAAGACTTGTTTTTAAGTCCAAAAAACTCAATGGTGTTCTTTCTTCTGCTATAGGAAACCTCACAGAGCTTAAAGAAATTTCTGTTTCAAACAACCAAATAATTGACTTTATCCCACCCCAGATTGTTAACTGCAGAAAGCTTGAGATTATTGACCTCAGAAACAACCATTTCTCTGGTGAACTTCCCTCTGAATTGTCCTCTCTCGTTCGCCTTCGAGTCCTCGATGTCTCTTCCAATAGCCTCTCTGGAAACTTGAACTTCCTCAAGTTTTTTCCAAATATGGAAACTCTCAACATAGCTGATAACCTCTTCACAGGAAGAGTTCCCCCTTCCATACGTTCCTTTAGAAATCTTAGACAATTCAACTTTTCAGGGAACCTTTTTCTTGAAGGTTCTGTTTCTTCAGATAATGTCCCTAAGCGTTACAAATTCGCCGAGAGATCGAATGGAAGAATAAATAGTCCTGCACCTGGTCCAAAACCCAGCAAGAGTAGGTTTAACACTGCTCCATCTCCGGCTCCATCGGGAGCGAAAACACATCACCATAAGTTAACCAAGAGAGAACTAGCTGAGTGTATTCTTGGTTTTCTTGGTGGAGCATTCGCAGGGAGTGTATTAGGCCTCATATGTTTTATCATGTTCAAATTGGCTATGGCTTTGGCCAAAAGAAGTCGAAAGAGCTCAGATGGTGCTTCAATTTATAGTCCTTTGATAATCAAGAAAAAAGAGGACTTAGCATTCTTGGAGAAAGAGGATGGACTAGCTTCATTTGAACTCATTGGAAGAGGTGGGTGTGGAGAGGTTTACAAGGCTGAACTACCGGGAAGCGACGGTAAAATAATTGCCATAAAGAAGATTGTTCAGCCTTCAAAGGAAGCAGCAGAGTTGGCTGATGAAGATAGTAGACTTTTGCATAAGAAAATGCGCCAAATTCGATCCGAGATTAAAACAGTTGGCCAAATTCGCCATCGCAATCTTCTGCCATTGGTAGCTCATGTCTCTCGGCCTGATTGTCACTATCTTGTTTATGAATACATGAAGAATGGAAGCTTACAGGATGTTCTGAACAAAGTTGAAGCTGGCGAAAGGGAATTGGATTGGTTGACAAGGCACAAGATTTCTGTTGGCATTGCAGCCGGCCTTGAATACCTTCACTTGAGCCATAGCCCGCGAATTATTCATAGAGATCTCAAGCCAGCAAATGTTCTTCTTGATGATGATATGGAAGCTCGAATTGCAGATTTCGGACTCGCGAAAGAGATACCTGATGCTCAAACACACATCACAGCTTCAAATGTGGCTGGCACTGTGGGGTATATAGCACCTGAGTATTACCAGATACTCAAGTTCACCGATAAGTGTGACGTATACAGCTTCGGGGTTCTGCTAGGTGTCTTGGTGATGGGAAAGCTTCCATCTGATGAATTTTTCCAGCACACAGATGAAATGAGTTTGGTTAAGTGGATGAGAAATGTGATGACTTCAGAAAATCAAAAGGAAGCAATTGATGCCAAGCTTATGGGAAATGGATATGAGGAGCAAATGCTTCTAGTTTTGAAGATTGCCTGCTTTTGCACTTTGGATGATCCTAAACAGAGACCTAACAGTAAGGATGTTAGGTGTATGTTGTCTCAAATTAAGCACTAA 1890 0.4153 MASKSHHLCLFTLFSLFSHFSFTTHANLYLHPLDLNALTTLHKDLKIKGQLQRHTTHPCNIDGVFCEKRLSNKESYVLRITRLVFKSKKLNGVLSSAIGNLTELKEISVSNNQIIDFIPPQIVNCRKLEIIDLRNNHFSGELPSELSSLVRLRVLDVSSNSLSGNLNFLKFFPNMETLNIADNLFTGRVPPSIRSFRNLRQFNFSGNLFLEGSVSSDNVPKRYKFAERSNGRINSPAPGPKPSKSRFNTAPSPAPSGAKTHHHKLTKRELAECILGFLGGAFAGSVLGLICFIMFKLAMALAKRSRKSSDGASIYSPLIIKKKEDLAFLEKEDGLASFELIGRGGCGEVYKAELPGSDGKIIAIKKIVQPSKEAAELADEDSRLLHKKMRQIRSEIKTVGQIRHRNLLPLVAHVSRPDCHYLVYEYMKNGSLQDVLNKVEAGERELDWLTRHKISVGIAAGLEYLHLSHSPRIIHRDLKPANVLLDDDMEARIADFGLAKEIPDAQTHITASNVAGTVGYIAPEYYQILKFTDKCDVYSFGVLLGVLVMGKLPSDEFFQHTDEMSLVKWMRNVMTSENQKEAIDAKLMGNGYEEQMLLVLKIACFCTLDDPKQRPNSKDVRCMLSQIKH 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0757 629 Gene3D Ribonuclease Inhibitor 34 168 IPR032675 -
Lal21g0757 629 Gene3D Ribonuclease Inhibitor 169 223 IPR032675 -
Lal21g0757 629 ProSiteProfiles Protein kinase domain profile. 335 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0757 629 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE KINASE 8 629 - -
Lal21g0757 629 Pfam Protein kinase domain 338 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0757 629 Gene3D Phosphorylase Kinase; domain 1 324 426 - -
Lal21g0757 629 SUPERFAMILY L domain-like 38 211 - -
Lal21g0757 629 MobiDBLite consensus disorder prediction 241 255 - -
Lal21g0757 629 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 8 629 - -
Lal21g0757 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Lal21g0757 629 SMART serkin_6 335 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0757 629 MobiDBLite consensus disorder prediction 225 262 - -
Lal21g0757 629 Pfam Leucine rich repeat 103 162 IPR001611 GO:0005515
Lal21g0757 629 Gene3D Transferase(Phosphotransferase) domain 1 427 629 - -
Lal21g0757 629 SUPERFAMILY Protein kinase-like (PK-like) 331 624 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0757 Lal-Chr21 6265827 6267716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0757 34 629 Receptor kinase-like Gene Family AT2G31880 61.678 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Lal21g0757 Pkinase 8.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0757 - - gmx:100811980 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0757 21 6265827 6267716 Lal21g0757 21 6265827 6267716 ECH
Lal17g0877 17 6728598 6730499 Lal21g0757 21 6265827 6267716 LSH