Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0749 ATGAGTGCTCCAATGGAGATCTCTCTACAAAACCCTTCAACCGACGAAACCTCCGACCAAAACGGCGTCGTCGTTTCCCAACACCCACCTCCTTCTCTTATCCTTCCCCAGGAGAAATTTCTTGTCCCTGTTGAGGTATGCTTAAAACCTTCCAGCACAGCTCGGATTGATGATGTTCGTTCTGCGGTTGAGCGGATGCTTGAAAAGAGGAGTTTGAGCTATAATGATGGACCCATTCCTGTCCCCCCTGATGAAATATTTCTTGCAGATAACGTTCAAAGAATCTGTGTTTGTGATACAGATGAAGGGATGCACAATGATAACGTTCTTTTGTTCTGGCAAGTGAAGCCTGTTGTGCATGTCTATCAGCTAAGTGAGGAAGGACCATCTGAGGAAATAAGTTCTGATGGCCAGACTTCCACTTTCAATGAATGGACTCTTCCTGCAAAAGAATTTGATGGCATGTGGGAAAGCTTAATGTATGAATCTGGTCTAAAGCAAAGGTTGTTACGTTATGCAGCAAGTGCTTTGCTCTTTACTGAAAAGTGTGTTGATCCATTCCTTGTTTCATGGAATCGCATAATTCTTTTGCATGGGCCTCCTGGGACAGGAAAGACATCTTTATGTAAAGCATTAGCTCAAAAACTATCAATTCGGTTCAATTCAAGATACCCACTGTGCCAGCTGGTTGAAGTGAATGCACATTCTTTGTTCAGTAAATGGTTCTCTGAAAGTGGCAAACTGGTTGCAAAACTTTTCCAAAAAATTCAAGAGATGGTGGAGGAAGAAAGCAATCTGGTATTTGTTTTGATTGATGAAGTTGAAAGCCTTGCAGCCGCTAGAAAAGCTGCTCTATCTGGTTCTGAACCTTCAGACTCTATTCGGGTTGTCAATGCATTACTAACTCAGATGGATAAATTAAAATCATCTCCAAATGTGATAATACTAACCACCTCCAACATAACTGCTGCTATCGATATTGCTTTTGTTGATCGAGCTGATATCAAAGCATATGTTGGTCCCCCGACTCTTCATGCTCGGTATGAAATATTAAGGTCTTGCTTGCAAGAACTGATGCGTACAGGGATCTTAAGTAGTTTACAGGATTGTACGGATGTGACACTTCCAAATTATGCTAGAGCAAAGGAATGGTTAAATGCACCAGATTCACATGAGGCTGTGCTACTCTGCAAGAAACTACTTGAATCTGCAGAAGCATGTGAGGGAATGAGTGGAAGAACTTTGAGAAAGCTTCCATTTTTGGCACACGCTAACCTTACCAATCATTTTGATTGCGACCCGATTAAGTTCTTGTGTACGATGATAGAAACGGCGAAGAGGGAGCGTTCTGAGCTTCCTGACTAA 1365 0.4212 MSAPMEISLQNPSTDETSDQNGVVVSQHPPPSLILPQEKFLVPVEVCLKPSSTARIDDVRSAVERMLEKRSLSYNDGPIPVPPDEIFLADNVQRICVCDTDEGMHNDNVLLFWQVKPVVHVYQLSEEGPSEEISSDGQTSTFNEWTLPAKEFDGMWESLMYESGLKQRLLRYAASALLFTEKCVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFNSRYPLCQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEESNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLHARYEILRSCLQELMRTGILSSLQDCTDVTLPNYARAKEWLNAPDSHEAVLLCKKLLESAEACEGMSGRTLRKLPFLAHANLTNHFDCDPIKFLCTMIETAKRERSELPD 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0749 454 Gene3D - 132 359 IPR027417 -
Lal21g0749 454 ProSitePatterns AAA-protein family signature. 313 332 IPR003960 GO:0005524|GO:0016887
Lal21g0749 454 PANTHER PACHYTENE CHECKPOINT PROTEIN 2 35 451 IPR044539 -
Lal21g0749 454 MobiDBLite consensus disorder prediction 1 26 - -
Lal21g0749 454 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 420 IPR027417 -
Lal21g0749 454 CDD AAA 193 341 - -
Lal21g0749 454 SMART AAA_5 191 343 IPR003593 -
Lal21g0749 454 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 195 213 IPR001270 GO:0005524
Lal21g0749 454 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 309 323 IPR001270 GO:0005524
Lal21g0749 454 Pfam ATPase family associated with various cellular activities (AAA) 195 340 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0749 Lal-Chr21 6163605 6170163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0749 195 368 Calmodulin-binding Proteins AT3G56690 30.114 2.72e-13 70.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0749 21 6163605 6170163 Lal21g0749 21 6163605 6170163 ECH