Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0723 ATGTCTCCCAAAGGCCTAAATAATCCAATGAGCACATTAGATGAATGGATTCCCGCTTGTGATGAAGAATTGAAACCTGTAATTGGAAAGATATTTGATATATTGGAGGAAGGAAGCAACTTTTATAAAAGTTATGCACATGCTAATGGTTTTAGTGTTCGCAATTCATCCGAAACAACAGATAAAAGTGGTGTTAAGTGGAAGTATTTTCTTTGCTCTAAAGAAGGTTACAAGGTAGAGAAAAAATTAGAACTAGTTGAATTGCTTGTTGATGAAAAAAGATTGCCTACAAGTAGAAGAAGAAAACTAACAAGGGAAGGGTGTAAAGCAAGAATTGAAGGAAAATTTACAGTTCAACGATTTCATGAAGATCATACACACGCATTAGCCACACCAAGAAAGAAACAATTCCTTAGGTCTGTAAGAAGTGTAAACAATGTTCATAAGAATTTGTTATTTTCTTATAGTAGAGCTAACGTGGGGACATCAAAAAGTTGGGGATATGACAATATAGGATGCACACAACGGAATCTCCAAAACTATTCTAGAGATTTGAAAGTCTTGATCAAAGACTCTGATGCACATGTATTTATTGATAATTTTAGGAGAAAGTGTGAAATGGATAAGTCATTTTACTATGACTACGAAAAAATTACTCATTGTTTGGTAATTGAATTATGGAATGTTTGTGTTGATTGTGGAGTTAAAGGAACAAAAGAGGAAAACGGAATAGCATTTTTTGATATACTTGATAACACAATGGTCAATGACAACAAAGTGAACAAGCTTAGAGAAGTTGTTTATCAACCTTCTTCTAATCATGTTGCACAATGTTCGTGTAAAATGTTTGAATCTGAAGGCATGTTATGTCGACATATCCTTTTTGTATTAAAGGGGAAAGGTTTAAGTGAAATCCCAAAATTTTACATTGTCAATAGGTGGACAACGATAGCAACTAGCAAACCAGTTTTTGATTATGATGGCAATATATTGGAGGCATGTTCTAAATCACAAAGTCAGGCCAAGATGATTTCATATACATAG 1044 0.3352 MSPKGLNNPMSTLDEWIPACDEELKPVIGKIFDILEEGSNFYKSYAHANGFSVRNSSETTDKSGVKWKYFLCSKEGYKVEKKLELVELLVDEKRLPTSRRRKLTREGCKARIEGKFTVQRFHEDHTHALATPRKKQFLRSVRSVNNVHKNLLFSYSRANVGTSKSWGYDNIGCTQRNLQNYSRDLKVLIKDSDAHVFIDNFRRKCEMDKSFYYDYEKITHCLVIELWNVCVDCGVKGTKEENGIAFFDILDNTMVNDNKVNKLREVVYQPSSNHVAQCSCKMFESEGMLCRHILFVLKGKGLSEIPKFYIVNRWTTIATSKPVFDYDGNILEACSKSQSQAKMISYT 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0723 347 Pfam FAR1 DNA-binding domain 40 130 IPR004330 -
Lal21g0723 347 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 18 154 - -
Lal21g0723 347 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 253 330 - -
Lal21g0723 347 ProSiteProfiles Zinc finger SWIM-type profile. 264 301 IPR007527 GO:0008270
Lal21g0723 347 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 253 330 IPR031052 GO:0006355
Lal21g0723 347 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 18 154 IPR031052 GO:0006355
Lal21g0723 347 Pfam SWIM zinc finger 276 297 IPR007527 GO:0008270
Lal21g0723 347 SMART 26again6 276 303 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0723 Lal-Chr21 5808328 5809438 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal21g0723 FAR1 7.9e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0723 - - ccaj:114916444 191.815