Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0709 ATGGGAAATTGTTTTCGAGCTCATTCTAAGGTTGTTAGTTCTGTGTCCTCTCACCCCAATTTCGTAGATGCTGCTAAAGTTCCTGGTACAAGCATCCATTCCTTAGTTCACTTAAGTCGAACTGTAGTTGGATACAGCGCCGAAAGTAAACATGTGACTCTGCCTGCTCCAAGATCTGAAGGTGACATACTTTCCTCCCCGCATCTAAAAGCCTTCACTTTCAAATATCTGAAGTTCGCTACGAGAAACTTTCATCCGGATAGTCTAATAGGAGAAGGGGGATTTGGTAATGTCTACATCGGGCGGATTGATGAGCAATTCCTTGGTGCTGCAAGGCCTGGATCTGGAACAATGGTAGCTGTGAAGAGGCTTAAAGCTGAAGGTTTTCAAGGGCACAAGGAGTGGTTGTCCGAAGTCGACCATCTCGGACAACTTCAGCATCCAAATCTTGTCAAACTTTATGGATATTGTTTAGATGGGGATAATAGGCTTCTAGTCTATGAGTACATGCCAAAGGGTAGTTTGGAGAATCATCTATTTTGCAGGGGAGCACACCCACTTTCCTGGGCAACAAGGATCAAAGTTGCCATTGGTGCTGCACAAGGTCTCACCCTCTTGCATGACTCTAAGCAACAAGTTATCTACCGTGATTTCAAGGCTTCTAATATTCTATTAGATTCGGAATTTAATGCAAAACTATCAGACTTTGGTCTGGCCAAAGCAGGGCCAACTGGAGATCGTTCTCATGTTTCTACTCAAGTTCTGGGCACAGAAGGCTATGCTGCTCCTGAATATATTGCTACAGGTCGGCTGACGACAAAGTGTGATGTCTATAGCTTTGGAGTTGTGCTATTGGAACTACTATCCGGGCGCCGGGCAGTCGATAAAACAAAATCTAGAGAGGAACAAAACCTGGTAGAATGGTCAAGACCCTATTTATATGATAGGAGGAAGTTGCTCCGGATTATGGACATCAAGTTAGCAGGGCAATATCCGAAAAGAGCAGCTTATATAGCTGCAAATCTTGCATTACAATGCACTAGTGAGGCCAAAATCAGACCACAAATGTCTGAGGTTTTATCTACTTTAGAACTGCTGCCAACCATGACACACTCAATTTCAGGCAGCCCATGTAGATCGGAGAGGAAGTCGATCTCGAGCCCGATGAGAGACCGTATGTCGATCTCTTATAGTCCCATGATTAATTCCCCTTTGAGAGATATATAA 1227 0.4409 MGNCFRAHSKVVSSVSSHPNFVDAAKVPGTSIHSLVHLSRTVVGYSAESKHVTLPAPRSEGDILSSPHLKAFTFKYLKFATRNFHPDSLIGEGGFGNVYIGRIDEQFLGAARPGSGTMVAVKRLKAEGFQGHKEWLSEVDHLGQLQHPNLVKLYGYCLDGDNRLLVYEYMPKGSLENHLFCRGAHPLSWATRIKVAIGAAQGLTLLHDSKQQVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRSHVSTQVLGTEGYAAPEYIATGRLTTKCDVYSFGVVLLELLSGRRAVDKTKSREEQNLVEWSRPYLYDRRKLLRIMDIKLAGQYPKRAAYIAANLALQCTSEAKIRPQMSEVLSTLELLPTMTHSISGSPCRSERKSISSPMRDRMSISYSPMINSPLRDI 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0709 408 CDD STKc_IRAK 90 366 - -
Lal21g0709 408 ProSiteProfiles Protein kinase domain profile. 84 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0709 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Lal21g0709 408 Gene3D Transferase(Phosphotransferase) domain 1 170 376 - -
Lal21g0709 408 Gene3D Phosphorylase Kinase; domain 1 56 169 - -
Lal21g0709 408 ProSitePatterns Protein kinases ATP-binding region signature. 90 122 IPR017441 GO:0005524
Lal21g0709 408 PANTHER OS01G0588500 PROTEIN-RELATED 30 394 - -
Lal21g0709 408 Pfam Protein tyrosine and serine/threonine kinase 88 303 IPR001245 GO:0004672|GO:0006468
Lal21g0709 408 PANTHER BNAC02G17010D PROTEIN 30 394 - -
Lal21g0709 408 SUPERFAMILY Protein kinase-like (PK-like) 68 376 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0709 Lal-Chr21 5692981 5697359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0709 70 368 Glycoside Hydrolase AT3G07070 53.135 3.77e-105 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal21g0709 PK_Tyr_Ser-Thr 9.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0709 - - lang:109338813 764.222