Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0700 ATGTTGGGAGATATAACAACAGGACCTGTCTATAGTTTCACGCATTGGCTCCAATTTGTTGGTAAACGTACTTCTTCTATGTATCATTGCTTTTCCATGCCTTCTAGCCCAACAAAATCCATTGAGGATGGAAGGAGTGATCAACTATCTGAACAAACAGAAATTAGTTTATGGGAGAGGCTTGGTAGAGCCGAAATGTTGGACGTCGAATCGAGCTCATTTTCTTGGGACCGGCTCTCTTCACTATACCATACTGAACACAGTAGCAGCAATGACTATTCTGAGGATGAAATGAACAGAGCTCTTGAGGTAACTGTAAATTCCGGAGGGGTTGTCTTCTTTGCCTTTTTCAATGGCCTGGGGAATGATGATGGTTTTCCAAAAGAAGCAGCAGCTGTTATAAAGATATCATCATCAAGAATGGCAACACAGTCGGAACGCCTTGGGTATGAATTTGCGAAGTGGTTGGGAGTCCCAACTCCACAGGCTAGAGTCATTCACAACACCACTTTGGAATGGCTCCAAATAAAGGAAGCTGCAGAAAAAGCAAGAGATGCTGCAAGTTCTAAGAGTGATGAAATTGGTGAAATGACATGCTTTGAACTTTTGGAAGCACTTGAGCTTAGCCGATGTCTCCTTTTTATGAGTTATGTACATGGTTCACCTTTGCTTGAAAGCTCTTGTGCATTTGAATCACGGGAGTCAGCAGAAAGAACATCAGCAGCCCTTGGGAGGGTAATGATGTTGGACCTCGTTATCAGAAATGAAGATAGACTTCCTTGTCGTCAACTAAGATGGCGTGGGAACTCTGCAAATTTATTGCTGGCTGAAAATATGATCTCTGCAAATACAGACACACTAGAAGAAGCTTTTGATTCTGCAATGAACCAATACAGGACGAGGGTGACTAGGGCACTTCAAAATCAAAGGTCCACTTCTGATAGCAGATTGAGTTCTCATAATCCTGTGTTGGCATCAGCAGGCTCTGATCTTTCAGATGTCAAAGAATCACCAATATCTGCTGACATGGGCTTTAAAGGCCAAACGTCAAGAGAATCATTGCGTACTGACTTTAACATTGTCGCTATTGATTCTGGTGTTCCTCGCCGACCCCCCGCTGGAAAACGTGCAAATGATCAGGTTAACTATCCCAAGTTGGTTGAGTTACTACTCAATAGTTCTGAGTTTTCCTCTAACCTGTTACATGATATAACTGGAGGAAGATTAGGATTTCCTCCACCAGAAGACATAAATACAACAACTGATGTACATGTAACATCAGTAGTTCATGAGTTCCGTAGTGGTTTTCGTGCTGCTCTTAGGGACCTGCAGGGATTCCATATATTCCTTCTCACACTTCACCAAAAACTTGATAACCTGTTATCTTTATTTATGAATATTATAAGTAAAATATCATTGGCAGAATCTGAAAAAGAGGATTCAATGGTTCCTGACTCACCTTCTCTGGCTGCTATTGTCAGTTGTCCGTCTCCAACAAGTAAGGAGAGGTTTTCTAATTATAACCATCAAGATTTTAGTGATTCAGAATCACAGAGAAGCGCTCCAAGGGCATCATCATCTTCAGGCAATAGAGATTGTTGTGACTCTGCTTCTATGTCAAGAGAAAGTTGGCATGGAAAATCACTTCGTAGTCTCTGCTTGACAACTAAACTTCGTGACTTTCATAAATTTGCCAAGGTTGATGCAGAATCTAATAAAGAATTGGAACAGTGGAATGAAATGCTTAAAAATGATGCCATCAAGTTATGCCTGGAGAACAATTTCAACTCAGGATTTTTTGAGGGTAGTGATAACAACAGTGTTATTGATGCATATGAACTAAAGGTCAGACTTGAACATATCCTTGAAAGGATTGCATTGATATCTGAAGCTGCAAGTACAGAGAGACCATCCATTGTTACAAATACTCTGCTCATTGGTGGAGCACTGGCTGCAAGATCTGTATACACACTGCAATACTTAGGGATCACACATATTTTGTGTTTGTGTACTAATGAAATTGGACAGTCAGATTCTCAGTTTCCTGATCTATTTCAATACAAAAATTTCTACGTGTGTGACAACGAAGATTCTAACATCAGCGACATATTTGAAGAAGCTTGTGATTTTATAGATCGTGTTGAGCAAACCGGTCAAAAGATTTTAGTTCATTGCTTTGAGGGGAGAAGCAGGAGTGTCACTTTGGTCCTTGCTTACTTAATGCTCAAGAAGAAGTTCACATTATTAGAAGCATGGAATGCTCTGAAGCGAGTTCATCGTCGGGCACAACCCAATGATGGTTTCGCAAAGGTCTTACAGGAACTGGATCACAAACTGCATGGAAAAGTTTCAATGGAGTGGCAGCAAAGGAAACCGACGATGAAAGTTTGTCCTGTCTGTGGTAAGAATGCTGGAATAAGCAGCGGCTCGCTTAAGCTCCATCTTCAGAAATCGCATAAAAAGCTGTCGTCGGGGAGTGTTGACAGTGCCATGACAATGGAGATTGAGAAGGCTTTGACAGCTTTGAAGATTAGTCGCGGTGGGAGTGTAAGCCCCACACAAAGGCAGTCTCATTCAATGATATATGAATAG 2592 0.4128 MLGDITTGPVYSFTHWLQFVGKRTSSMYHCFSMPSSPTKSIEDGRSDQLSEQTEISLWERLGRAEMLDVESSSFSWDRLSSLYHTEHSSSNDYSEDEMNRALEVTVNSGGVVFFAFFNGLGNDDGFPKEAAAVIKISSSRMATQSERLGYEFAKWLGVPTPQARVIHNTTLEWLQIKEAAEKARDAASSKSDEIGEMTCFELLEALELSRCLLFMSYVHGSPLLESSCAFESRESAERTSAALGRVMMLDLVIRNEDRLPCRQLRWRGNSANLLLAENMISANTDTLEEAFDSAMNQYRTRVTRALQNQRSTSDSRLSSHNPVLASAGSDLSDVKESPISADMGFKGQTSRESLRTDFNIVAIDSGVPRRPPAGKRANDQVNYPKLVELLLNSSEFSSNLLHDITGGRLGFPPPEDINTTTDVHVTSVVHEFRSGFRAALRDLQGFHIFLLTLHQKLDNLLSLFMNIISKISLAESEKEDSMVPDSPSLAAIVSCPSPTSKERFSNYNHQDFSDSESQRSAPRASSSSGNRDCCDSASMSRESWHGKSLRSLCLTTKLRDFHKFAKVDAESNKELEQWNEMLKNDAIKLCLENNFNSGFFEGSDNNSVIDAYELKVRLEHILERIALISEAASTERPSIVTNTLLIGGALAARSVYTLQYLGITHILCLCTNEIGQSDSQFPDLFQYKNFYVCDNEDSNISDIFEEACDFIDRVEQTGQKILVHCFEGRSRSVTLVLAYLMLKKKFTLLEAWNALKRVHRRAQPNDGFAKVLQELDHKLHGKVSMEWQQRKPTMKVCPVCGKNAGISSGSLKLHLQKSHKKLSSGSVDSAMTMEIEKALTALKISRGGSVSPTQRQSHSMIYE 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0700 863 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 1 861 - -
Lal21g0700 863 CDD DSP 637 774 - -
Lal21g0700 863 Pfam Dual specificity phosphatase, catalytic domain 657 775 IPR000340 GO:0008138|GO:0016311
Lal21g0700 863 Pfam Actin-fragmin kinase, catalytic 54 337 IPR015275 -
Lal21g0700 863 SUPERFAMILY Protein kinase-like (PK-like) 39 380 IPR011009 -
Lal21g0700 863 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 701 757 IPR000387 GO:0016311|GO:0016791
Lal21g0700 863 MobiDBLite consensus disorder prediction 306 326 - -
Lal21g0700 863 ProSiteProfiles Dual specificity protein phosphatase domain profile. 636 781 IPR020422 GO:0006470|GO:0008138
Lal21g0700 863 MobiDBLite consensus disorder prediction 306 331 - -
Lal21g0700 863 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 1 861 IPR035010 GO:0004721|GO:0009737|GO:0043622
Lal21g0700 863 SMART dsp_5 636 778 IPR020422 GO:0006470|GO:0008138
Lal21g0700 863 MobiDBLite consensus disorder prediction 498 533 - -
Lal21g0700 863 Gene3D - 223 339 IPR036940 GO:0016301
Lal21g0700 863 Gene3D Protein tyrosine phosphatase superfamily 619 791 IPR029021 -
Lal21g0700 863 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 636 781 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0700 Lal-Chr21 5576695 5584605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0700 1 847 Protein tyrosine phosphatase (PTP) family AT5G23720 62.815 0.0 1057
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0700 K14165 - gmx:102661225 1285.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0700 21 5576695 5584605 Lal21g0700 21 5576695 5584605 ECH