Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal21g0695 | ATGTATTTCCAGAAACTCCAAGACTCACCTATGTTCCGGCAACAGCTGCAGATAATGGAAGAAAGTTCAGAAGCGTTACGCTCCAGATGTTGGAAGTTCTATAAAGGTTGTCGAAAATACACGGAAGGACTAGGAGAGGCATATGATGGAGATATAGCATTTGCAAATGCAGTTGAAAATTTTGTAGGAGGGCATAGTGATCCTTTATTTGTAACTTTGGGAGGACCTGTTATGGCCAAATTCACTATTGCTTTGAGAGAAATCAGTACACACAAGGAACTTCTTCGGTCAGAGGTGGAGCACATGCTGAATGACAGATTATTGAACATTCTAAATGTTGAAATCCTTGATGTCAAGGAAGCTCGAAGGCGTTTTGTCAAATCCTCACTTGCATATGACCAGGCGCGTGAAAAATTTATGTCATTGAGAAAAGGCACCAAGTTTGATACAGCCGCTGTCATAGAAGAGGAATTGCACAATGCAAGAAACTCATACGAGGAAGCCCGTTTCAATCTGGTCAGTGCTCTTCATAATATTGAGGCCAAGAAGAGATTTGAGTTTTTGGAGTCTGTCACTGCAGTTATGGATGCTCATCTTCGTGTTCCCGATTTATTGAGTGAATGGGAGATTTCCTTCATTTTATCTGCTATGCTTCAGGTTTTGGCTTATGCACAAAAGTCAAGAGAAAGTGCCAATGAGGAGCAGATTTCTCTTTGTGAAAGAATGGTACAGTACAAACAACTAGCCCGTGAAGAAAGTAAGTTGTCCTCGAATGGTCCTTATAGTTCACCAAGTGGAGACAGTATGCAACATTTTTCGAGGATATCGAATAAAGTGGTAGATGCAGTAACAGAATCTTCTGCAAATGGAAAGGTTCAAATCATTAGACAAGGCTATCTTTCAAAACGATCCTCAAATTTGAGGGGTGACTGGAAGAGAAGGTACTTTGTTCTTGATAGTCGTGGAATGCTTTACTACTATCGTAAACCATTGATTGGGTTACAAGGAGGCAATCAACCATGTGTACCGATGAATTATGCCACTGAAAATAGTTCGGGGATTCTGACTCGGTTGCTTTCTTCGCAATACCATGGAGTTATCCCGGATGAGAGATCTGTTGCACGTCATACAGTGAACCTGTTGACATCAACAATCAAGATTGATTCTGAGCAGTCAGATTTAAGATTCTGCTTCAGGATTATTTCACCATCAAAGATTTATACATTGCAGGCAGAAAATGCACTGGACCAGATGGATTGGATGGAAAAGATAACTGGAGTAATTGCCTCCTTGTTGAGCGCACAGACATTGGAAACGCCTCGCTCAACTGACTCAGAAGGCAGTGAACTTTACTCTGCCAGCAAGCTTGAGTTCTTACTAAGTTCTCCAGATGATGATTGGGCAGTGAGTATGGATTTAGCATCGAAGAACTTCACCCCGAATAGTTCACCGATAGGCTTGAAAGGGAATAAACAAAATATGAAAGGAGAAAAGCCAATTGATGTTCTTAGAAAGGTTAGCGGCAATGACAAATGTGCTGATTGTGGTAAACCTAAACCTGACTGGGCATCCTTGAACCTCGGCATCCTTATATGCATTGAATGTTCGGGTGTTCATCGTAATCTTGGTGTACATATGTCAAAAGTAAGGTCACTGACACTTGATGTGAAAGTCTGGGATTCCTCCATATTAACCATGTTTCAGTCACTAGGAAATATGTTCACAAACTCAGTTTGGGAAGAGCTTTTGCATTCAACAAATCCTTCAATAACTGATGACACACCTGTTTGTTCACCCAAGGCCAGCACAAACAAGTTATTTCATGCAAGAAAACCAAAACATGATGATCCTATTTCACTAAAGGAGAGGTTCATTCATGCAAAGTACTCTGAGAAAGTCTTTGTTCGCCGGGTGACAAAAAATCATCGTATCCCTTCAGTGGAACAACAGGTGTGGGAAAGCATATGCACCAACGACCCGAAAGCAGTGTACCGACATATTGTCAGTTCAGATGTAGATGTCAATGCTATCAATGGACAAGCATTAGATGGCAATTCTCTCAACATGACTTCTTCAACTAATCCAAACATAGCATCTCAAAGTACACATCAATTAATGGAGGACATACAAGAGGGTTCTAGTGTGCTTCACCTGGCATGCCTTACTTGTGATGCCGGAATGGTGGAGCTACTCCTACAGTATGGGGCAGATGTAAATGCTATTGATTCAAGAGGTCGGACACCACTACATTACTGCATTTTGAGAGGGAAGATTGCAGCTGCAAAAGTGCTTATTACAAGAGGGGCCAATCCACATGTGGTAGATAAAGAAGGCAACACTCCTCTCAAGCTTGCATCTGAACCCAGCACTGTAGGCAATGAAATTGATTCTCTCTTAACAAGCACCACATGA | 2412 | 0.4154 | MYFQKLQDSPMFRQQLQIMEESSEALRSRCWKFYKGCRKYTEGLGEAYDGDIAFANAVENFVGGHSDPLFVTLGGPVMAKFTIALREISTHKELLRSEVEHMLNDRLLNILNVEILDVKEARRRFVKSSLAYDQAREKFMSLRKGTKFDTAAVIEEELHNARNSYEEARFNLVSALHNIEAKKRFEFLESVTAVMDAHLRVPDLLSEWEISFILSAMLQVLAYAQKSRESANEEQISLCERMVQYKQLAREESKLSSNGPYSSPSGDSMQHFSRISNKVVDAVTESSANGKVQIIRQGYLSKRSSNLRGDWKRRYFVLDSRGMLYYYRKPLIGLQGGNQPCVPMNYATENSSGILTRLLSSQYHGVIPDERSVARHTVNLLTSTIKIDSEQSDLRFCFRIISPSKIYTLQAENALDQMDWMEKITGVIASLLSAQTLETPRSTDSEGSELYSASKLEFLLSSPDDDWAVSMDLASKNFTPNSSPIGLKGNKQNMKGEKPIDVLRKVSGNDKCADCGKPKPDWASLNLGILICIECSGVHRNLGVHMSKVRSLTLDVKVWDSSILTMFQSLGNMFTNSVWEELLHSTNPSITDDTPVCSPKASTNKLFHARKPKHDDPISLKERFIHAKYSEKVFVRRVTKNHRIPSVEQQVWESICTNDPKAVYRHIVSSDVDVNAINGQALDGNSLNMTSSTNPNIASQSTHQLMEDIQEGSSVLHLACLTCDAGMVELLLQYGADVNAIDSRGRTPLHYCILRGKIAAAKVLITRGANPHVVDKEGNTPLKLASEPSTVGNEIDSLLTSTT | 803 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal21g0695 | 803 | SUPERFAMILY | BAR/IMD domain-like | 6 | 316 | IPR027267 | - | |
Lal21g0695 | 803 | ProSiteProfiles | Ankyrin repeat region circular profile. | 744 | 776 | - | - | |
Lal21g0695 | 803 | ProSiteProfiles | Ankyrin repeat region circular profile. | 711 | 742 | - | - | |
Lal21g0695 | 803 | Coils | Coil | 151 | 171 | - | - | |
Lal21g0695 | 803 | CDD | ArfGap | 500 | 629 | - | - | |
Lal21g0695 | 803 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD1 | 1 | 801 | - | - | |
Lal21g0695 | 803 | PANTHER | CENTAURIN/ARF | 1 | 801 | IPR045258 | GO:0005096 | |
Lal21g0695 | 803 | SMART | arf_gap_3 | 497 | 642 | IPR001164 | GO:0005096 | |
Lal21g0695 | 803 | ProSiteProfiles | Ankyrin repeat profile. | 711 | 743 | IPR002110 | GO:0005515 | |
Lal21g0695 | 803 | Gene3D | - | 686 | 801 | IPR036770 | - | |
Lal21g0695 | 803 | PRINTS | HIV Rev interacting protein signature | 509 | 528 | IPR001164 | GO:0005096 | |
Lal21g0695 | 803 | PRINTS | HIV Rev interacting protein signature | 528 | 545 | IPR001164 | GO:0005096 | |
Lal21g0695 | 803 | PRINTS | HIV Rev interacting protein signature | 551 | 572 | IPR001164 | GO:0005096 | |
Lal21g0695 | 803 | Pfam | PH domain | 295 | 428 | IPR001849 | - | |
Lal21g0695 | 803 | SMART | 5bar | 2 | 223 | IPR004148 | GO:0005515|GO:0005737 | |
Lal21g0695 | 803 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 497 | 642 | IPR001164 | GO:0005096 | |
Lal21g0695 | 803 | Pfam | Putative GTPase activating protein for Arf | 500 | 636 | IPR001164 | GO:0005096 | |
Lal21g0695 | 803 | Gene3D | Arfaptin homology (AH) domain/BAR domain | 3 | 251 | IPR027267 | - | |
Lal21g0695 | 803 | Pfam | BAR domain of APPL family | 6 | 199 | - | - | |
Lal21g0695 | 803 | ProSiteProfiles | PH domain profile. | 293 | 429 | IPR001849 | - | |
Lal21g0695 | 803 | Gene3D | Arf GTPase activating protein | 483 | 643 | IPR038508 | - | |
Lal21g0695 | 803 | Gene3D | - | 286 | 444 | IPR011993 | - | |
Lal21g0695 | 803 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 498 | 637 | IPR037278 | - | |
Lal21g0695 | 803 | SMART | ANK_2a | 744 | 773 | IPR002110 | GO:0005515 | |
Lal21g0695 | 803 | SMART | ANK_2a | 711 | 740 | IPR002110 | GO:0005515 | |
Lal21g0695 | 803 | SMART | PH_update | 294 | 431 | IPR001849 | - | |
Lal21g0695 | 803 | Pfam | Ankyrin repeats (many copies) | 713 | 765 | IPR002110 | GO:0005515 | |
Lal21g0695 | 803 | SUPERFAMILY | PH domain-like | 217 | 428 | - | - | |
Lal21g0695 | 803 | CDD | PH_ACAP | 296 | 433 | - | - | |
Lal21g0695 | 803 | CDD | BAR_SFC_plant | 15 | 209 | IPR035670 | - | |
Lal21g0695 | 803 | SUPERFAMILY | Ankyrin repeat | 658 | 787 | IPR036770 | - | |
Lal21g0695 | 803 | ProSiteProfiles | Ankyrin repeat profile. | 744 | 776 | IPR002110 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal21g0695 | Lal-Chr21 | 5504403 | 5515813 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal21g0695 | 496 | 636 | C2H2 Transcription Factor Family | AT4G21160 | 37.324 | 1.94e-20 | 91.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal21g0695 | K12489 | - | gmx:100797073 | 1110.52 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal17g0817 | 17 | 5994251 | 6003753 | Lal21g0695 | 21 | 5504403 | 5515813 | LSH | |
Lal19g1002 | 19 | 13879876 | 13890772 | Lal21g0695 | 21 | 5504403 | 5515813 | PCT | |
Lal21g0695 | 21 | 5504403 | 5515813 | Lal19g1002 | 19 | 13879876 | 13890772 | PCT |