Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0680 ATGGACAAGTACGAAGCAGTGAAGGATTTAGGGGCTGGTAATTTTGGGGTGGCAAGGCTTATGAGGCACAAGGAAACCAAGGAGCTTGTTGCCATGAAATATATCGAGCGTGGTCACAGGATTGATGAGAATGTGGCAAGAGAGATTATCAACCATCGGTCCCTTAGGCATCCCAATATAATTCGATTCAAGGAGGTGGTTTTGACTCCCACACATTTAACAATAATAATGGAGTATGCTGCTGGAGGAGAGCTCTTTGAGAGGATATGCAGTGCTGGCAGGTTCAGTGAAGATGAGGCCAGATATTTCTTCCAGCAGCTGATCTCTGGTGTCCATTTCTGTCATGCCATGCAAATATGCCACAGAGATTTGAAGCTAGAAAATACCCTTTTAGATGGAAGTCCTGCACCTCGCTTGAAAATTTGCGATTTTGGTTATTCCAAGTCATCTTTGCTGCATTCAAGACCCAAATCAACTGTTGGAACACCTGCTTATATAGCACCAGAGGTTCTTTCTAGGCGAGAGTATGATGGCAAGTTGGCTGATGTATGGTCATGTGGGGTGACTCTATATGTCATGCTTGTTGGAGCATATCCCTTTGAGGACCAGGACGACCCTAGGAATTTTAGGAAAACGATTCAGCGGATAATGGCTGTTCAGTACAAAATCCCTGATTATGTTCATATATCTCAAGATTGCAGACACCTTCTCTCTCGTATATTTGTTGCAAATCCGTTGAGGAGAATTACTTTGAAGGAAATTAAGAACCACCCATGGTTTCTAAAGAATCTTCCAAGGGAGCTAACTGAATCAGCTCAAGCTATATATTATCAGAGAGACAACCCAATGTTTCATGTTCAAAGTGTGGATGAGATAATGAAAATTGTGGGAGAGGCAAGGAACCCACCTCCAGTTTCTACTGCTGTCAAAGGTTTTGGCTTCGAAGGCGAGGAAGATGAAGGAGAAGATTTGGATGGAGAAGTCGAGGTAGAGGAAGACGACGACGAAGACGAGTATGATAAGAGGGTCAAAGAGGTTCATGCAAGTGGAGAATTCCAAATTAGTTGA 1068 0.4326 MDKYEAVKDLGAGNFGVARLMRHKETKELVAMKYIERGHRIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLTIIMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVHFCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISQDCRHLLSRIFVANPLRRITLKEIKNHPWFLKNLPRELTESAQAIYYQRDNPMFHVQSVDEIMKIVGEARNPPPVSTAVKGFGFEGEEDEGEDLDGEVEVEEDDDEDEYDKRVKEVHASGEFQIS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0680 355 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0680 355 PANTHER SERINE/THREONINE KINASE 2 348 - -
Lal21g0680 355 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2H 2 348 - -
Lal21g0680 355 SUPERFAMILY Protein kinase-like (PK-like) 2 297 IPR011009 -
Lal21g0680 355 MobiDBLite consensus disorder prediction 316 339 - -
Lal21g0680 355 MobiDBLite consensus disorder prediction 310 355 - -
Lal21g0680 355 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0680 355 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lal21g0680 355 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0680 355 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Lal21g0680 355 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Lal21g0680 355 CDD STKc_SnRK2 3 259 - -
Lal21g0680 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0680 Lal-Chr21 5278416 5285124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0680 3 306 CBL-interacting serine-threonine protein kinases AT2G26980 37.812 5.13e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lal21g0680 Pkinase 2.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0680 K14498 - gmx:100804018 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0680 21 5278416 5285124 Lal21g0680 21 5278416 5285124 ECH
Lal21g0680 21 5278416 5285124 Lal4g0657 4 4972359 4976021 LSH
Lal14g1408 14 15363921 15366547 Lal21g0680 21 5278416 5285124 PCT
Lal19g0980 19 13717213 13721247 Lal21g0680 21 5278416 5285124 PCT
Lal21g0680 21 5278416 5285124 Lal14g1408 14 15363921 15366547 PCT
Lal21g0680 21 5278416 5285124 Lal19g0980 19 13717213 13721247 PCT