Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0671 ATGAAGTTAATCGGCGACGACAGCGGCGGCGTCGACGCCCGGAAGAAAGTGTTGATCGGAGTTAAGTTAGACGAACGGAGCATGGAATTGCTGACGTGGACACTTCTTAATGTTGCCGTTCCCGGCGACCTTATCATTGTGCTTCACGTTATTGAAACCATCTCTGCAGGAACAGCATCGGTACTTTCTATACTCAAACGTTTCGATTCCGTTATCTCCACTTACAAAGGCTTCTGCAATTTACAGCAGGTTGATCTGAGGCTTAAACTGTGTAGAGGTGTTTCACCTCGGAAGGTTATAGTACAAGAGGCTAACTCATTTGGTGTTTCGGTAGTTATTCTTGGAATTTCAAAAACGCACCACACGATTCGTTCTTATTCATTGATTGCCAAGTATTGTGCAAAGAAATTGCTTAAGTGTGTTTCTGTTTTCTCTGTTGATAATGGCAAAATTGCTTTCCAAAGAGAAGCTTCTAGAAGTTGCAGTTGTCAAGAAAAAATACATGAAGGCCAAAGCAGTTCACCGAATTTGTTGGTATCTTGTAAGAAGAAAACTTTGACGAATTGTGAAAGTTTTGAGAAAAGGTTGTCTGATGACGATCTTGTAAAGGAAAATTCATTGGCTTTGGTACCATTTCTAAAACTTGATAATAGTGATCCTCTTAGTTATTCAATTATGGTGAGTAATTCAGACCAGTTGAAATGTGGTTGTTCAATAATTCACCAAGTGCTTCACCGAAAGTGTTCACTTTCAAAGTCACCATGGAAGAGAAGATTTGTTTTTCAACCTGCATTGCGACGGCTCAACTGGAATTTGTCAGCTGTAGTCCATCCAGATCATAAACAGACTAATGATGACAAGAATAATTGTTCCACCCATTATGGGGAGAGTGGTGCTATTCTTCCATTTGGATCTAATGCTAATTTTCCTCTTCCTTCGATATGTGGTGAAGTGACTAGTCTTCCTGAAGAATTGTTGGGCTTACAGGAGAACTACTCATCTTTATGCAGAATCTATAGTTTACAGGAACTTGTATTTGCAACCGCTAACTTCTCACCCGTAAATTTGGTTGGAAAAGGTGGTAGTAGTTATGTTTACAGAGGATGTCTACCGGATGGCAAGGAATTGGCTGTGAAAATTTTAAAGCCATCTGAAGATGTGGTAAAAGAGTTTGTTCAGGAAATTGAGATCATTACAACTTTGCATCACAAGAACATAATACCTCTATCTGGCTTTTGTTTTGAGAGAAACCATTTACTACTGGTATATAAATTTTTATCAAGGGGAAGCCTAGAAGAAAACCTTCATGGTAATAAGAAGGACTGCAATGCACTTGGTTGGCAAGAGAGGTACCGGGTGGCTGTCGGTGTAGCTGAGGCATTGAATTATCTGCATAATGGCTGTGCAAAGGCTGTGATCCATAGGGATGTTAAATCTTCCAATATCCTTCTTTCGGCTGATTTTGAGCCTCAGCTCTCAGATTTTGGACTGGCTAGTTGGAGTTCTTCTTCTTCTTCTTCCAATATTACTTGTCTTGATGTAGCCGGAACCTTTGGATACCTAGCTCCTGAATACTTGATGCACGGTAAAGTGACTGACAGAATTGATGTATATGCTTTTGGTGTTGTACTCCTTGAGCTTCTCTCAAATAGGAAGCCCATTAACAATGACTGCCCAAAGGGCCAGGAGAGCCTTGTTATCTGGGCAACTCCAATTTTGAAAGATGGGAAGCTTTCCCAGTTGCTTGATCCAAGCTTAGGCATTGAATATGACCATGGCCAGATTCAAAGGATGGTTTTGGCTGCTACTCTCTGCATTAGACGAGCACCTAGATCGCGACCTGAAATTAGCCTTATACTAAAACTTTTACAAGGTGACGAAGAAGTGACAAGATGGGCAGAACAAGAAATTAGTGCACCACAAGATTTCGATGGAGCTGATGGGGAACCGAGTGCGATTAATATCCAGTCCCATCTGAACCTTGCTTTGCTGGACTTGGATGATGATGATGCAGTTTCTATCAGTAGCGCTGAGCAGAATGTCTCATTGGAGAACTATTTGCTGGGAAGGTGCAATGGCTCTTCAAGTTCTGTCTAA 2097 0.412 MKLIGDDSGGVDARKKVLIGVKLDERSMELLTWTLLNVAVPGDLIIVLHVIETISAGTASVLSILKRFDSVISTYKGFCNLQQVDLRLKLCRGVSPRKVIVQEANSFGVSVVILGISKTHHTIRSYSLIAKYCAKKLLKCVSVFSVDNGKIAFQREASRSCSCQEKIHEGQSSSPNLLVSCKKKTLTNCESFEKRLSDDDLVKENSLALVPFLKLDNSDPLSYSIMVSNSDQLKCGCSIIHQVLHRKCSLSKSPWKRRFVFQPALRRLNWNLSAVVHPDHKQTNDDKNNCSTHYGESGAILPFGSNANFPLPSICGEVTSLPEELLGLQENYSSLCRIYSLQELVFATANFSPVNLVGKGGSSYVYRGCLPDGKELAVKILKPSEDVVKEFVQEIEIITTLHHKNIIPLSGFCFERNHLLLVYKFLSRGSLEENLHGNKKDCNALGWQERYRVAVGVAEALNYLHNGCAKAVIHRDVKSSNILLSADFEPQLSDFGLASWSSSSSSSNITCLDVAGTFGYLAPEYLMHGKVTDRIDVYAFGVVLLELLSNRKPINNDCPKGQESLVIWATPILKDGKLSQLLDPSLGIEYDHGQIQRMVLAATLCIRRAPRSRPEISLILKLLQGDEEVTRWAEQEISAPQDFDGADGEPSAINIQSHLNLALLDLDDDDAVSISSAEQNVSLENYLLGRCNGSSSSV 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0671 698 Pfam Protein kinase domain 354 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0671 698 ProSiteProfiles Protein kinase domain profile. 351 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0671 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Lal21g0671 698 Gene3D Transferase(Phosphotransferase) domain 1 426 640 - -
Lal21g0671 698 Gene3D HUPs 14 140 IPR014729 -
Lal21g0671 698 PANTHER OS01G0253100 PROTEIN 15 184 IPR045271 GO:0004714|GO:0006468
Lal21g0671 698 PANTHER OS01G0253100 PROTEIN 213 691 IPR045271 GO:0004714|GO:0006468
Lal21g0671 698 SUPERFAMILY Protein kinase-like (PK-like) 331 623 IPR011009 -
Lal21g0671 698 SMART serkin_6 351 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0671 698 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 15 117 - -
Lal21g0671 698 Pfam Universal stress protein family 14 122 IPR006016 -
Lal21g0671 698 CDD USP_Like 16 141 - -
Lal21g0671 698 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Lal21g0671 698 Gene3D Phosphorylase Kinase; domain 1 323 425 - -
Lal21g0671 698 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 15 184 - -
Lal21g0671 698 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 213 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0671 Lal-Chr21 5215775 5219619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0671 339 630 Trihelix Transcription Factor Family AT5G38560 42.088 1.12e-72 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lal21g0671 Pkinase 5.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0671 - - gmx:100815722 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0671 21 5215775 5219619 Lal21g0671 21 5215775 5219619 ECH
Lal1g0168 1 1063443 1066113 Lal21g0671 21 5215775 5219619 ECH
Lal9g0123 9 812890 819414 Lal21g0671 21 5215775 5219619 ECH