Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0664 ATGCCCACGTGGTGGAGTAAAAAACCCAACAAGAACACCAAAACCCAACAACACCAAACAAATGGAAATTCCAATAGTACCCTCAACTTCAACAAGGTTAAGAAAAACGCTGAAAAACCAAAGAGTTTCGATGAAGTCACCGGCGCCGCCTTTCTCTCCCGGAATTCCCCTCGAGCCAGCAAGGATTTTACTTCATACGGTGGCGCCGCCGTTGATGTTGATGGTGGTGTTAAGATAGGACTCCCTTTACCACGCCCTTGTGTTTCTTCTAGCTTCAGCAATGAACAAGCCCTTGTTTTTGGATCTGGTTCCTTTTCTGCTGGTTCTAGCGTTAGTTCCTCTGGCTCCGTTGATGATCATTCGATTTCTCAAATGAATGCTTCGAGAAGGCAAGTTGACATGAAGTTCAATGTGAGGCCAAAAAGCCCGGGTCCTGCTTCAAGAGGGCCCACCAGCCCTAATTCACCTCTCCATTCAAGGTTGAATGTTTTGAGTCTTGATTCCTCCACTAGTCGGCAAGAAGATGGAAGGAGTCAATGTCATCCATTGCCACTTCCCCCGGGCTCTCCTACAAGTCCTTCTTCTCTTTCCAACATACGAGCAAATGGACAGCTAGAAAATAATACCAGTAACCGGGGCAAGTGGAAGAAAGGAAAGCTTCTGGGACGGGGAACATTTGGACATGTTTACCAAGGATTCCATAGTGAAACTGGACAAATGTGTGCAATAAAAGAAGTTAGGGTTGTCTGTGATGACCAATCTTCAAAAGAATGTCTCAAACAACTTAATCAGGAGATAAATTTGCTTAGTCAGCTTTCACATCCAAACATTGTTCAATACTATGGAAGTGACTTGGGAGAAGAAGCACTTTCGGTTTATTTGGAATTTGTATCTGGCGGTTCTATTCATAAACTACTTCAGGAATATGGACCCTTTGGGGAGCCGGTTATTCAAAATTATACGAGGCAGATTGTCTCCGGACTTTCCTATCTTCATGGAAGAAATACATTACATAGGGATATCAAAGGGGCTAACATACTAGTCGATCCTAATGGTGAAATCAAGCTGGCAGACTTTGGAATGGCTAAACATATAAATTCTTCTGCCTCAATGCTTTCATTCAAAGGAAGTCCATACTGGATGGCACCTGAGGTTGTGATGAATACAAACAGTTATAGTCTTCCTGTTGATATATGGAGTTTGGGATGCACAATTCTTGAAATGGCAATGGGGAAGCCTCCTTGGAATCAGTATGAAGGGGTAGCAGCAATATTTAAAATTGGTAACAGCAAAGATATGCCCGAAATTCCTGAGCATCTTTCAAATGATGCAAAGAACTTCATTAAGTTATGCTTACAAAGAGATCCATCAGCTCGTCCAACAGCGCAAATGCTACTAGACCATCCCTTTATTCGAGACCAGTCAGCAACAAAATCTGTGAATGTCCGAATAACGAAAGATGCTTTCCCTTACATGTTTGATGGAAGCCGGACGCCGCCAGTTTTAGAGCATCATTCCAATTCCAATAGAACAAATAACACTTTAATTGACGGAGACTATGCAACGAAGCAAGTTGTTGCATCTTCACGAGGAGTAAAGAGTACAAGAGATAACACAAGAATGATCACATCTTTACCAGTGTCTCCCTGCTCAAGTCCATTGCGACAATATGGACCGGCACACAAGAGTTGTTTCTTTTCTCCTCATCATCCTTCATACACAATGACGGGACAAAATAACCTCAATTCATATCCATTAAGATCGAACGCCACATTCACCCTTGAACCATGGCAGGAAAAGTCTCTATACAGAGGTCACACCCCACCCGGTGGATCCCCAAGAACGAGACTCATTTGA 1857 0.4308 MPTWWSKKPNKNTKTQQHQTNGNSNSTLNFNKVKKNAEKPKSFDEVTGAAFLSRNSPRASKDFTSYGGAAVDVDGGVKIGLPLPRPCVSSSFSNEQALVFGSGSFSAGSSVSSSGSVDDHSISQMNASRRQVDMKFNVRPKSPGPASRGPTSPNSPLHSRLNVLSLDSSTSRQEDGRSQCHPLPLPPGSPTSPSSLSNIRANGQLENNTSNRGKWKKGKLLGRGTFGHVYQGFHSETGQMCAIKEVRVVCDDQSSKECLKQLNQEINLLSQLSHPNIVQYYGSDLGEEALSVYLEFVSGGSIHKLLQEYGPFGEPVIQNYTRQIVSGLSYLHGRNTLHRDIKGANILVDPNGEIKLADFGMAKHINSSASMLSFKGSPYWMAPEVVMNTNSYSLPVDIWSLGCTILEMAMGKPPWNQYEGVAAIFKIGNSKDMPEIPEHLSNDAKNFIKLCLQRDPSARPTAQMLLDHPFIRDQSATKSVNVRITKDAFPYMFDGSRTPPVLEHHSNSNRTNNTLIDGDYATKQVVASSRGVKSTRDNTRMITSLPVSPCSSPLRQYGPAHKSCFFSPHHPSYTMTGQNNLNSYPLRSNATFTLEPWQEKSLYRGHTPPGGSPRTRLI 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0664 618 MobiDBLite consensus disorder prediction 151 177 - -
Lal21g0664 618 MobiDBLite consensus disorder prediction 192 211 - -
Lal21g0664 618 MobiDBLite consensus disorder prediction 109 131 - -
Lal21g0664 618 Gene3D Transferase(Phosphotransferase) domain 1 212 494 - -
Lal21g0664 618 SMART serkin_6 215 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0664 618 SUPERFAMILY Protein kinase-like (PK-like) 213 472 IPR011009 -
Lal21g0664 618 ProSiteProfiles Protein kinase domain profile. 215 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0664 618 MobiDBLite consensus disorder prediction 1 43 - -
Lal21g0664 618 MobiDBLite consensus disorder prediction 109 217 - -
Lal21g0664 618 MobiDBLite consensus disorder prediction 1 33 - -
Lal21g0664 618 ProSitePatterns Protein kinases ATP-binding region signature. 221 244 IPR017441 GO:0005524
Lal21g0664 618 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 599 - -
Lal21g0664 618 CDD STKc_MEKK1_plant 214 471 - -
Lal21g0664 618 Pfam Protein kinase domain 216 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0664 618 PANTHER MAP KINASE KINASE KINASE 1 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0664 Lal-Chr21 5135985 5142060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0664 1 495 MAP Kinase Kinase Kinase AT1G53570 59.172 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lal21g0664 Pkinase 1.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0664 K04421 - gmx:100813122 866.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0664 21 5135985 5142060 Lal21g0664 21 5135985 5142060 ECH
Lal17g0739 17 5268767 5274525 Lal21g0664 21 5135985 5142060 LSH
Lal21g0664 21 5135985 5142060 Lal4g0627 4 4667493 4673371 LSH
Lal15g1393 15 16104818 16110124 Lal21g0664 21 5135985 5142060 PCT