Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0662 ATGAATTTGATTCCAGGGTTTCGGTTTCACCCCACTGATGTTGAGCTGGTTAAGTATTTTCTCAAGAGGAAGGTCTTAGGGAAGAAATTCCCCTTTGATGTTATTGCTGAAGTTGAGATTTACAAGTATGCTCCTTGGGATCTCCCAGATATGTCGTTGATTAAAACTGGTGATTTAGAATGGTTCTTCTTTTGCCCTCGAGGGAAGAAATATGCAAGTGGAGCGAGGATGAATCGAGCAACAGAATTTGGGTATTGGAAGACTACTGGGAAGGATAGATCGATTGAACATAGAAATGAAGTTGTGGGCATGATTAAGACCTTGATATTTCATACGGGTAAAGCACCTAAAGGAAACCGAACTGATTGGGTTATGCACGAATTCAGACTTGAAGATAAGGAGCTATCTGATAAAGGCATTCACCAGGACTCCTATGTAATTTGTAAGGTGTTTCAAAAGGAAGGTCTTGGTCCCAGAAATGGTGCACAATATGGAAGACCATTTAAAGAAGAAGAATGGAATGAGGACGGGGAAATTGGTTGTGTAGAATCTCTCCCTGTTGCAGCTACATCTTCTGAAGGCCCCTTTCAGTTCACTGCATGTCAAAGTTCTGTTGCAAAAGACCTGCATCCTTCTACAAGTGAAGGCATTGGGTTGACCTCTGTGCCATGTCTATCCGAATTCACGCCTTCTTGTTTGACACTTACTCCAGCTCCTCCAAGTAGTAGTAATCAAGCTGAAGATGACATTTTATTAATGCTCGATTATTTCAAAGACGATGACACACTGGCTCTGAATGAGAACAACAAAATTAAGGAGTTTGAAAATACTGGCCAGGATAGTATTGCTGATGACACATCTTATTTTGATCCGAATGAGATATTTGAGGGTTTGGGAGACCTCAACGACAACTTGGTTGGATTGGGTGATGGACATGGTTTTTCATGTGGCGAAAAAGATGCGTATAACACCAACGAAATGCTTTCTACAAGTGATATCTTGGGGTTTGACGACCCTACCGACTTCTTGGAGTTGAGTGACTTAGATGCGCCATTGTTGTGGCAGATTAAACATGATTGA 1080 0.4148 MNLIPGFRFHPTDVELVKYFLKRKVLGKKFPFDVIAEVEIYKYAPWDLPDMSLIKTGDLEWFFFCPRGKKYASGARMNRATEFGYWKTTGKDRSIEHRNEVVGMIKTLIFHTGKAPKGNRTDWVMHEFRLEDKELSDKGIHQDSYVICKVFQKEGLGPRNGAQYGRPFKEEEWNEDGEIGCVESLPVAATSSEGPFQFTACQSSVAKDLHPSTSEGIGLTSVPCLSEFTPSCLTLTPAPPSSSNQAEDDILLMLDYFKDDDTLALNENNKIKEFENTGQDSIADDTSYFDPNEIFEGLGDLNDNLVGLGDGHGFSCGEKDAYNTNEMLSTSDILGFDDPTDFLELSDLDAPLLWQIKHD 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0662 359 ProSiteProfiles NAC domain profile. 3 153 IPR003441 GO:0003677|GO:0006355
Lal21g0662 359 Pfam No apical meristem (NAM) protein 5 130 IPR003441 GO:0003677|GO:0006355
Lal21g0662 359 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 3 232 - -
Lal21g0662 359 Gene3D NAC domain 12 156 IPR036093 GO:0003677|GO:0006355
Lal21g0662 359 SUPERFAMILY NAC domain 2 153 IPR036093 GO:0003677|GO:0006355
Lal21g0662 359 PANTHER PLANT NAC DOMAIN PROTEIN 3 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0662 Lal-Chr21 5101151 5105120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0662 3 272 NAC Transcription Factor Family AT5G09330 49.827 2.19e-91 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal21g0662 NAM 3.8e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0662 - - adu:107470479 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0662 21 5101151 5105120 Lal21g0662 21 5101151 5105120 ECH
Lal17g0738 17 5254474 5259475 Lal21g0662 21 5101151 5105120 LSH