Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0656 ATGCCAGTGAAGATTTTGAATGGAAGTGGATGTAAATTGGAGAAGGTGGTAGTAGGAGGAGAAGGAAAAGAGTACATTTTGAAGTCTAAAATCGGAGAGGGTTCATATTCGTTAGTTTGGAAAGCTGAGCAGAGACCAAGTGGTGAATTGGTGGCAGTGAAACAAGTTTTCCTTTCTAAACTAAACCCTTTTCTCAAAGCCTCTTTGGATAATGAGATCGATTTCTTGTCCTCTCTCAAACATCCTAACATCATTCGACTCATCCATTTCTTCCAGGTTGATGATGGATGTGTGTATCTGGTCCTGGAGTTTTGTGCTGGAGGGGATCTGGCTTCTTATATTCGACGCCATCGGAGAGTTCAACAAGAAACGGCCAGAAAATTCATGCAGCAGCTTGGCTCTGGTCTAAAAGTATTGCACTCTCACAATATCATTCACCGAGACTTGAAACCAGAGAACATTTTGCTATCAAACCATGGTGATGATGTGGTGCTAAAGATATCTGATTTTGGTCTCTCAAGGTAG 525 0.4171 MPVKILNGSGCKLEKVVVGGEGKEYILKSKIGEGSYSLVWKAEQRPSGELVAVKQVFLSKLNPFLKASLDNEIDFLSSLKHPNIIRLIHFFQVDDGCVYLVLEFCAGGDLASYIRRHRRVQQETARKFMQQLGSGLKVLHSHNIIHRDLKPENILLSNHGDDVVLKISDFGLSR 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0656 174 ProSiteProfiles Protein kinase domain profile. 25 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0656 174 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 30 174 IPR045269 GO:0004674|GO:0006914
Lal21g0656 174 Pfam Protein kinase domain 26 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0656 174 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Lal21g0656 174 Gene3D Transferase(Phosphotransferase) domain 1 13 174 - -
Lal21g0656 174 SUPERFAMILY Protein kinase-like (PK-like) 23 174 IPR011009 -
Lal21g0656 174 SMART serkin_6 25 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0656 174 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0656 Lal-Chr21 5016274 5019873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0656 24 173 CBL-interacting serine-threonine protein kinases AT2G30360 38.158 1.16e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Lal21g0656 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0656 - - lja:Lj1g3v1289070.2 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0656 21 5016274 5019873 Lal21g0656 21 5016274 5019873 ECH