Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0644 ATGGACTTAGCCGCGAAGCTTCACCGTCTAGACCTCACTTCAACCACCTTCCTCACCGGTTCAGTCATTCTAGACACTCCAAAACCCTCTCTCTCTATAACACGACACCGTTTTCGCCCACTCTCATTAAAATCCAACACCACCATCACTCGAAAACGCTTTTCCACTAAAACGACACGCCGTTTATCCGCTGTTGCCGTTAACGACACTTCCCTTTCCCAAACCGCAACCGAAGACCAAAACGACGACGTTGAGTCTCTCTTCTCCGACCCCACCACTGCCGAATTCGATAAACGACACCACGGCAACCGAAACGGCAACTCCGGCGCGTCAACGATTTCATCAGGTGTTAAATTAGAAAACGTTACGAAAACCTTCAAGGGTGTAACCGTTTTGAAGAACGTGACATGGGAAGTGAAGAAAACCGAGAAAGTTGGTCTCGTCGGCGTAAACGGTGCTGGGAAAACAACGCAGATGAGAATCATTGCTGGCCAAGAAGAGCCAGATTCAGGAAACGTGATCAAATCAAAATCCAACATGAAAATCGCGTTCTTAAACCAAGAATTCGAGGTTTCGCCGAGTAGAACGGTGAAGGAAGAGTTTATGAGTGCTTTTAAGGAAGAAATGGAGGTTGCCGCGAAGCTAGAGAAGGTTCAGAAGGCACTTGAGGGTTCTGTTAATGATTTGGAATTGATGGGGAGGTTATTGGATGAGTTTGATTTGCTTCAGAGGAGGGCGCAAAATGTTGATTTGGATGAAGTTGATGCGAAGATAAGTAAATTGGTGCCTGAGCTCGGGTTTGCGCCCGAGGATTCCGATAGATTGGTGGCTTCTTTTAGTGGTGGGTGGCAAATGAGGATATGTCTTGGCAAGATTTTACTTCAGGTATATGATTCTGAGCTAGATTTGCGTGGACACATGTATAATGGATATTTGTTAGTTGCTATTGCTTTTTGCATTTTTGAACTCAAATTGCAACTTAATGTTGAGGACCCAGATTTATTACTGTTGGATGAGCCCACAAATCACCTTGACCTTGATACCATTGAGTGGCTTGAAGACTATCTTAACAAACAGGATGTGCCAATGGTTATCATTTCCCATGACAGAGCTTTTCTAGACCAGCTGTGTACAAAAATTGTGGAAACTGACATGGGTGTATCCAGGACATTTGAGGGGAACTATTCTCAGTATATACTTTCAAAGGCAGCATGGATCGAAGCACAGTATGCTGCATGGGAGAAGCAGCAGAAAGAAATTGAACAGACAAGAGACTTGATAAGTAGATTAAGTGCCGGAGCAAATTCTGGCCGTGCATCATCTGCTGAGAAGAAGCTGGAGAGACTTCAGGAAGAGGATATAGTAGAGAAGCCGTTTGAACGTAAACAAATGAAAATCAGGTTCCCTGAGCGTGGAAGGAGCGGAAGGTTTGTTGCAATGATTAAGAGCTTGGAATTTGGTTTTGAGGATAAGACACTTTTCAAAAAGGCAAATCTTACAATTGAAAGAGGAGAAAAAATTGCTATCATTGGTCCAAATGGATGTGGCAAGAGTACTTTACTTAAATTGATAATGGGTTTGGAGAAGCCAATTGCCGGTGAAGCTGTGCTTGGGGAGCATAATGTATTACCTAACTATTTTGAGCAAAATCAGGCTGAAGCACTTGATCTGGACAAAACAGTGCTTGAGACAGTAGAAGAAGCTGCGGAGGACTGGAGGATTGATGATATCAAAGGACTCCTTGGGCGTTGTAATTTTAAATCTGACATGCTTGATCGAAAAGTTTCCCTATTGAGTGGTGGTGAGAAGGCACGACTGGCTTTTTGCAAATTCATGGTAAAACCGTCAACTCTGCTTGTGTTGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTTGAGGAGGCGATAAATGAGTACCAGGGCACAGTTATTACGGTGTCTCATGATCGATACTTTATAAAGCAGATTGTTAATAGAGTGATAGAAGTTAACGACGGCATATTACAGGATTATGCAGGTGGTTACAATTATTATTTGGAGAAGAATCTTGATGCTAGAGAAAGAGAGCTTGAACGAGAGGCCGAGATTGATGACAAAGCTCCTAAAGTGAAAGCCAAGTCTAAGATGTCCAAGGCTGAAAAAGAAGCACGGAAGAAACAGAAGATGCAGGCCTTTCAAGCAGCAAAACAAAAGTCTAAAGGTGCCAAAAATTCAAAGAGATGGAATTGA 2241 0.4297 MDLAAKLHRLDLTSTTFLTGSVILDTPKPSLSITRHRFRPLSLKSNTTITRKRFSTKTTRRLSAVAVNDTSLSQTATEDQNDDVESLFSDPTTAEFDKRHHGNRNGNSGASTISSGVKLENVTKTFKGVTVLKNVTWEVKKTEKVGLVGVNGAGKTTQMRIIAGQEEPDSGNVIKSKSNMKIAFLNQEFEVSPSRTVKEEFMSAFKEEMEVAAKLEKVQKALEGSVNDLELMGRLLDEFDLLQRRAQNVDLDEVDAKISKLVPELGFAPEDSDRLVASFSGGWQMRICLGKILLQVYDSELDLRGHMYNGYLLVAIAFCIFELKLQLNVEDPDLLLLDEPTNHLDLDTIEWLEDYLNKQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTFEGNYSQYILSKAAWIEAQYAAWEKQQKEIEQTRDLISRLSAGANSGRASSAEKKLERLQEEDIVEKPFERKQMKIRFPERGRSGRFVAMIKSLEFGFEDKTLFKKANLTIERGEKIAIIGPNGCGKSTLLKLIMGLEKPIAGEAVLGEHNVLPNYFEQNQAEALDLDKTVLETVEEAAEDWRIDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAINEYQGTVITVSHDRYFIKQIVNRVIEVNDGILQDYAGGYNYYLEKNLDARERELEREAEIDDKAPKVKAKSKMSKAEKEARKKQKMQAFQAAKQKSKGAKNSKRWN 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0644 746 PANTHER ABC TRANSPORTER F FAMILY MEMBER 5 327 736 - -
Lal21g0644 746 PANTHER ABC TRANSPORTER F FAMILY MEMBER 5 40 297 - -
Lal21g0644 746 CDD ABCF_EF-3 481 670 - -
Lal21g0644 746 ProSitePatterns ABC transporters family signature. 279 293 IPR017871 GO:0005524
Lal21g0644 746 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 475 694 IPR003439 GO:0005524
Lal21g0644 746 CDD ABCF_EF-3 117 382 - -
Lal21g0644 746 Coils Coil 706 735 - -
Lal21g0644 746 SMART AAA_5 141 391 IPR003593 -
Lal21g0644 746 SMART AAA_5 503 666 IPR003593 -
Lal21g0644 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 460 684 IPR027417 -
Lal21g0644 746 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 387 IPR027417 -
Lal21g0644 746 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 117 410 IPR003439 GO:0005524
Lal21g0644 746 Pfam ABC transporter 381 468 IPR032781 -
Lal21g0644 746 MobiDBLite consensus disorder prediction 94 113 - -
Lal21g0644 746 Pfam ABC transporter 132 295 IPR003439 GO:0005524
Lal21g0644 746 Pfam ABC transporter 495 626 IPR003439 GO:0005524
Lal21g0644 746 ProSitePatterns ABC transporters family signature. 598 612 IPR017871 GO:0005524
Lal21g0644 746 Gene3D - 113 435 IPR027417 -
Lal21g0644 746 MobiDBLite consensus disorder prediction 698 726 - -
Lal21g0644 746 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 327 736 - -
Lal21g0644 746 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 40 297 - -
Lal21g0644 746 MobiDBLite consensus disorder prediction 698 746 - -
Lal21g0644 746 Gene3D - 441 707 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0644 Lal-Chr21 4861369 4867295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0644 481 696 Calmodulin-binding Proteins AT2G36910 24.793 4.35e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0644 - - adu:107470294 1072