Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0627 ATGTCGTTTCCATTTCACCACCGTCGATCTCAATCGGAGCTACATTTCCGAATCCCCGACGACTTCGATCTCGATCTCGATCTCGATCCATACGATACACCTTCGCTCCATTTTCAAAATCCAGATCAACCTCCAAATCATGATGATCTTCTCTCCGCTTACATTGATTCCGATAATTCTGGATCCAATGTTCAACCACCGAAACCGGAAGACACCGGTGACGGAACGGCCAATGCGTCGAGTAGCAAAACCGGAAGGGCCGGTCACCGGCGAAGCAATTCTGATGATGGATCGTTGTCTTCGTTAATGGAAGGGATTGAGGCGAAGAAGGCTATGTCACCTGATAAGCTCGCTGAATTGTGGACCGTTGATCCTAAACGAGCCAAGAGGATTTTGGCCAATCGACAATCTGCTTCACGCTCAAAAGAAAGAAAGGCTGGTTATGTATTACAGCTTGAAAGAAAAATTCAAATTCTTCAAACAGAGGCGACTACTCTTTCAGCTCAGCTAAATCTTTTCCAGAGAGATACAACTGGTTTGTCTTCTGAAAACACCGAGCTTAAGCTTCAATTACAAGCTATGGAGCAACAAGCCAAGTTTTGTGATGCTCAAAATGAAGCACTGAAGAAAGAAGTTGATGGGCTCAAGATGGCTACTGGGGAGACAGTAACTCATGCCGATACCTATTTTGGAATGAATCAATTTTCGTATTCTCCTACTCTGTTCTTCTCACATCAGCCACAACAGTGGCCAGGCAGGCTTCACGCCATGCAAATGCCACAGATGCATGCACCCTCATATAATATGTCAGCTTCCCATCGGCCTATGCTTGATCCAGCCGCTCCATATGATTTGTCAGAAATGTTGTCGAGTGATTCTATTGACCAATTTCAAGGACTGGACATAAGCCACATGGCTTCTCACAATCTGATACATGATAGTCCCTCCATTTCTGTTAATAAAATCAACAATGCCTTTTGA 981 0.4455 MSFPFHHRRSQSELHFRIPDDFDLDLDLDPYDTPSLHFQNPDQPPNHDDLLSAYIDSDNSGSNVQPPKPEDTGDGTANASSSKTGRAGHRRSNSDDGSLSSLMEGIEAKKAMSPDKLAELWTVDPKRAKRILANRQSASRSKERKAGYVLQLERKIQILQTEATTLSAQLNLFQRDTTGLSSENTELKLQLQAMEQQAKFCDAQNEALKKEVDGLKMATGETVTHADTYFGMNQFSYSPTLFFSHQPQQWPGRLHAMQMPQMHAPSYNMSASHRPMLDPAAPYDLSEMLSSDSIDQFQGLDISHMASHNLIHDSPSISVNKINNAF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0627 326 CDD bZIP_plant_RF2 127 176 IPR044759 GO:0003700|GO:0006355
Lal21g0627 326 MobiDBLite consensus disorder prediction 53 87 - -
Lal21g0627 326 PANTHER BZIP TRANSCRIPTION FACTOR 18 6 322 - -
Lal21g0627 326 SMART brlzneu 122 186 IPR004827 GO:0003700|GO:0006355
Lal21g0627 326 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 6 322 - -
Lal21g0627 326 Coils Coil 184 211 - -
Lal21g0627 326 Gene3D - 126 175 - -
Lal21g0627 326 SUPERFAMILY Leucine zipper domain 126 180 IPR046347 GO:0003700|GO:0006355
Lal21g0627 326 Coils Coil 149 169 - -
Lal21g0627 326 Pfam bZIP transcription factor 126 184 IPR004827 GO:0003700|GO:0006355
Lal21g0627 326 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 124 187 IPR004827 GO:0003700|GO:0006355
Lal21g0627 326 MobiDBLite consensus disorder prediction 19 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0627 Lal-Chr21 4714741 4720109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0627 6 303 bZIP Transcription Factor Family AT2G40620 48.012 4.22e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal21g0627 bZIP_1 8.4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0627 - - gmx:100807712 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0627 21 4714741 4720109 Lal21g0627 21 4714741 4720109 ECH
Lal17g0665 17 4705101 4709333 Lal21g0627 21 4714741 4720109 LSH
Lal21g0627 21 4714741 4720109 Lal4g0577 4 4200310 4205164 LSH