Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0612 ATGAAGTTGCATTTCTCTATTGTTTCACTTGTTCTGCTATGCTTCATAGGAATACTATCCTTCCTTGGCTTAGTTGTGGCCGACTTAAACTCCGATGCGCAAGCTCTCTTGGAGTTTTCTTCCAGTGTCCCACATGGCCCAAGGCTCAACTGGAATGACACTTCTTCAATTTGCACCTCCTGGATTGGCGTGACTTGCAACTCGAATCGAACTCGTGTCATTGGCCTAAATCTTCCAGGAATTGGACTAACGAGTTCGATTCCAGAGAACAGCATAGAAAAACTTGATGCTCTTAGGGTCCTGAGCCTTCATTCCAATGGCCTAAAAGGAAACCTTCCTTCCAACATCCTCTCCATCCCGTCACTCCAATTTGCACACTTTCAGCACAACAACTTCTCAGGTCCAATTCCTTCTTTTGTCTCTCCTAAACTCATTGCATTAGATATTTCTTTCAACTCTTTTTCCGGCCCAATTCCACCGGCATTTCAGAACCTCAGAAGACTCACTTGGTTTTATCTTCAAAACAATTTTATATCCGGCGCTATCCCCGACTTCAATCTTCCAAGGCTCAAATATTTGAATTTGAGCTATAACAACTTGAATGGAACAATTCCAAATGCCATCAAGACATTCCCTTATACTTCTTTTGTTGGTAACTCTCTCTTATGTGGCCCACCTCTCAATCATTGCTCTTCAATATCCCCTTCTCCATCTCCTTCCACTGTTTACCAGCCACTCTCTCCATCAACCACCCAAAATCAAGATACTACCACTCATAAGAAAAAGTTCGGCCTAGCTCCAATACTAGCTCTAGTCATAGGAGGCATTGCCTTCATTTCTCTACTGGTTTTAGTGATCATAGTGTGCTGTTTCAAGACCAAAAACAGTAAAAGCAGTGGCATAATGAAAGGAAAGGCATCATCTTGTGCTGGAAAGACTGAGGTTTCAAAGAGTTTCGGGAGTGGCGTGCAAGAGGCTGAAAAGAACAAGTTGTTTTTCTTTGAAGGCTGCTCTGACAGCTTTGATCTTGAGGATTTACTAAAGGCTTCAGCTGAAGTTCTTGGAAAAGGGAGCTATGGTACAGCATATAAGGCTGTTTTGGAGGAAGGAACAACGGTCGTAGTTAAAAGGTTGAGGGAAGTTATGGTAGGAAAGAAGGAGTTTGAGCAGCAGATGGAAATCGTTGGGAGAATCGGACGCCACACCAATGTCATGCCTCTTCGAGCTTATTACTATTCGAAAGATGAGAAGCTTCTAGTTTACAACTACATGCCAGGGGGAAGCTTGTTTTTCTTGTTGCATGGAAACAGGGGTAGTGCAGGAAGAACTCCAATAGATTGGGACTCCAGAGTGAAGATTTCACTTGGAGCAGCCAAGGGAATTGCTTTCATTCACTCACAAGGGGGTCCAAAATTCACACATGGCAACGTCAAGTCCACCAATGTGCTCATAAACCAAGACTTCGATGCATGCATTACCGATACCGGATTGTCTCCTGTAATGAACACACCAGCAGCCATGTCTAGACTCAATGGCTATAGAGCACCAGAAGTAACAGACTCAAAGAAAATCACTCAGAAATCTGATGTTTACAGCTTCGGCGTGCTGCTTCTCGAAATGCTCACAGGCAAGACTCCACTGAGATATCCTGGCTATGAGGAAGTGGTTGATCTTCCAAGGTGGGTGAGGTCTGTTGTTAGAGAGGAATGGACTGCTGAGGTATTTGATGATGAGCTTCTTAGAGGTCACTATGTTGAAGAGGAAATGGTGCAAGTGCTTCAAATTGCACTGGCATGTGTTGCTAATGTGCCAGATATTAGGCCTAGAATGGATGAAATTGTTAGAATGATTGAAGAAATTAAGCATCCTGAGATGAAGAATATGCCATCATCTGGGTCTGACTCAAATGTGCCAACACCGAAATTGTTACAAGACAGTGACATATGTCAATTATAA 1956 0.432 MKLHFSIVSLVLLCFIGILSFLGLVVADLNSDAQALLEFSSSVPHGPRLNWNDTSSICTSWIGVTCNSNRTRVIGLNLPGIGLTSSIPENSIEKLDALRVLSLHSNGLKGNLPSNILSIPSLQFAHFQHNNFSGPIPSFVSPKLIALDISFNSFSGPIPPAFQNLRRLTWFYLQNNFISGAIPDFNLPRLKYLNLSYNNLNGTIPNAIKTFPYTSFVGNSLLCGPPLNHCSSISPSPSPSTVYQPLSPSTTQNQDTTTHKKKFGLAPILALVIGGIAFISLLVLVIIVCCFKTKNSKSSGIMKGKASSCAGKTEVSKSFGSGVQEAEKNKLFFFEGCSDSFDLEDLLKASAEVLGKGSYGTAYKAVLEEGTTVVVKRLREVMVGKKEFEQQMEIVGRIGRHTNVMPLRAYYYSKDEKLLVYNYMPGGSLFFLLHGNRGSAGRTPIDWDSRVKISLGAAKGIAFIHSQGGPKFTHGNVKSTNVLINQDFDACITDTGLSPVMNTPAAMSRLNGYRAPEVTDSKKITQKSDVYSFGVLLLEMLTGKTPLRYPGYEEVVDLPRWVRSVVREEWTAEVFDDELLRGHYVEEEMVQVLQIALACVANVPDIRPRMDEIVRMIEEIKHPEMKNMPSSGSDSNVPTPKLLQDSDICQL 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0612 651 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Lal21g0612 651 Pfam Protein kinase domain 352 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0612 651 Gene3D Phosphorylase Kinase; domain 1 313 423 - -
Lal21g0612 651 MobiDBLite consensus disorder prediction 628 651 - -
Lal21g0612 651 SUPERFAMILY L domain-like 41 228 - -
Lal21g0612 651 PANTHER OS05G0588300 PROTEIN 8 638 - -
Lal21g0612 651 Gene3D Ribonuclease Inhibitor 31 141 IPR032675 -
Lal21g0612 651 ProSitePatterns Protein kinases ATP-binding region signature. 354 385 IPR017441 GO:0005524
Lal21g0612 651 Pfam Leucine Rich Repeat 143 165 IPR001611 GO:0005515
Lal21g0612 651 Pfam Leucine Rich Repeat 189 209 IPR001611 GO:0005515
Lal21g0612 651 Gene3D Ribonuclease Inhibitor 142 231 IPR032675 -
Lal21g0612 651 MobiDBLite consensus disorder prediction 235 256 - -
Lal21g0612 651 Gene3D Transferase(Phosphotransferase) domain 1 424 638 - -
Lal21g0612 651 ProSiteProfiles Protein kinase domain profile. 348 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0612 651 CDD STKc_IRAK 354 620 - -
Lal21g0612 651 PANTHER RECEPTOR-LIKE KINASE 8 638 - -
Lal21g0612 651 SUPERFAMILY Protein kinase-like (PK-like) 352 620 IPR011009 -
Lal21g0612 651 MobiDBLite consensus disorder prediction 624 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0612 Lal-Chr21 4619800 4623509 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0612 14 638 Receptor kinase-like Gene Family AT5G58300 58.320 0.0 725
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal21g0612 Pkinase 5.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0612 - - aprc:113868460 1047.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0612 21 4619800 4623509 Lal21g0612 21 4619800 4623509 ECH
Lal6g0426 6 2698623 2702846 Lal21g0612 21 4619800 4623509 PCT
Lal21g0612 21 4619800 4623509 Lal6g0426 6 2698623 2702846 PCT