Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0595 ATGAAACCCTACTTCTCTGACAACAACACTATATATACATTTCACAATTTCATTTCCAAAACCCTAATCTCATTTCGCACTCCCAAACAACGATCCATCTCGTGCGTTGCGATGGGTTCCAGCGAGTTGGCTTGCTCTTACGCCACCTTGATTCTCCACGATGAAGAAATTGCAATCACCGCGGAGAAGATTTCCACTGTGTTGAAGGCTGCTCAGGTGAACGTTGAATCGTACTGGCCAAGTTTGTTTGCTAAGCTTGCTCAGAAGAGGAACATCGATGACCTCATCTTGAATTCCGGTGGAGGCGGTGCTGCTGCTGTTGCAGTTGCTGCTCCTGATGCTGCCGCCGGTGGTTCTGCCGCCGCAGCTCCAGCTGTTGAGGAAAAGAAGGAGGAGGCCAAGGAAGAAAGTGATGATGACATGGGTTTCAGCCTGTTTGATTAG 444 0.4887 MKPYFSDNNTIYTFHNFISKTLISFRTPKQRSISCVAMGSSELACSYATLILHDEEIAITAEKISTVLKAAQVNVESYWPSLFAKLAQKRNIDDLILNSGGGGAAAVAVAAPDAAAGGSAAAAPAVEEKKEEAKEESDDDMGFSLFD 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0595 147 MobiDBLite consensus disorder prediction 117 147 - -
Lal21g0595 147 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1-1-RELATED 38 147 - -
Lal21g0595 147 Gene3D - 39 100 IPR038716 -
Lal21g0595 147 CDD Ribosomal_P1 42 98 - -
Lal21g0595 147 Pfam 60s Acidic ribosomal protein 59 146 - -
Lal21g0595 147 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 38 147 - -
Lal21g0595 147 MobiDBLite consensus disorder prediction 125 141 - -
Lal21g0595 147 Hamap 50S ribosomal protein L12 [rpl12]. 43 147 IPR027534 GO:0003735|GO:0005840|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0595 Lal-Chr21 4484957 4486631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0595 38 147 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 58.772 2.04e-38 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0595 K02942 - rcu:8269526 121.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1532 3 21028810 21030240 Lal21g0595 21 4484957 4486631 ECH
Lal21g0595 21 4484957 4486631 Lal21g0595 21 4484957 4486631 ECH