Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0591 ATAAAAAGTGGGATAGTTGATCTCATTCCTAGTTGTGTTGTTGGGTTGGATGTGAAGAAGGTGCAGACCCTTCAAGCATTCCCTAGTAACAAGAATAATAATATGATGATGATGCTGCATCACAATCATCACCACTGTCCATTGTCACAACCCTTTGATAATGATCCCTCTGTAGCTGAAAATGATGGTCCCACTCACACTACTTATATGTCTAATCATATAAACCTTGTCACAGCAACTGGTTCTTATTCTGCTCTTGGTGCTAGTGCTGGTGCTAGTGCTGGTGCTGGTGCTACTTCTTCTGTACCTGTAAGACCTTTTCAGCAGCCTTCTGACATTTCTGCTTATTATACTTCTGGTATCACCACTTACCCTGCCTTCAAATCCTCAGATGTGATGGCAGCTTCAATGGGTTTTCCTTTCACAAGTGCACAATGGAAAGAGCTTGAAAGACAAGCTATGATTTACAAGTACATGATGGCTTCTGTTCCTGTTCCCCCTGATCTCCTTATCTCAACTGCTTCTCACTCTATTTTGAATGGTGGCTTAAATTTGAGGTTATCAAGCAGTGATTCTGAGCCAGGTAGGTGCAGAAGAACAGATGGTAAGAAATGGAGATGTTCAAGAGATGTAGCACCTAACCACAAGTATTGTGAGAGGCATATGCATAGAGGCCGTTCCCGTTCAAGAAAGCCTGTGGAAGTTCACACCAAAAATAACCAGAACCAGATCAAGATGACTCACCATGATTGTAATCCTTTTCCTATTTCTGATGTTAGTGTAGCTATTTATAATAACTCCACAACAAGAAAAGATGGATATTCTTCACTTTCTCTTCATAACTTTGGTGTCAAGTCTAGGAACTTTGACTCTGTGGCTTCTGTTTCCTCAAACAAGGCACCTAAGGGCATGGAGTGGATGCTGAATGGAGATCCTATTTCTCTTGGTGCTTCTGACTCAGAATTTCAGTGTATGATGCATAACAAAGTTGGATTGAACACTGAGCCTCAATATCTGAATTCATTTGCACTATATAATTCTGGTGTACTAGATCAACAGAACCAACACCCTCTGATGTTCCTTAATCCTCTTGATTATCCTAGGGAAAATCTCCAATCCCAGAAACCAAGAGGTTTCATTGATGCTTGGTCCAACACTGGATCAGAAGAAAGCAATGGTAACAACACCAACAACAAGAGCAGTGTTGCATCAATTGGTAAATTTTCTCTTGATCTATCAATGAGGGGTGATTCTGTGCATGAAGATATAGGTACTACTATTGACATGGGTTTAGGCCTAATGGAGCATAATGGAAACAACAACACACAACACAATGATGCTAAAACTCATCTCTCAAATTGGCTCGCCCGAACACCGACATCGACATCGACTTGGGTGGCTTCAACAACACTTGGAGGTCCATTAGCTGAAGTTTTAAGGCTTAGCAATGCCAATGCAACCAATGATGGAGCCTCTAATCCTTCATCTCATGTCATAACATATGCTGAATCAAGCAGAAGCTCTTTGGAAACATTGGTTTCATCCCCATCTGGTGTTTTGCACCAAACACTTGCTTCATTTTCTGATAGTAGTAGCAATAGCAGCCCAAGAGTTGCATCATCAAGGACTAGTATTTCAGATATTGCCATGCTCAGGTTCATTCAAAAGTAA 1671 0.4105 IKSGIVDLIPSCVVGLDVKKVQTLQAFPSNKNNNMMMMLHHNHHHCPLSQPFDNDPSVAENDGPTHTTYMSNHINLVTATGSYSALGASAGASAGAGATSSVPVRPFQQPSDISAYYTSGITTYPAFKSSDVMAASMGFPFTSAQWKELERQAMIYKYMMASVPVPPDLLISTASHSILNGGLNLRLSSSDSEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRSRSRKPVEVHTKNNQNQIKMTHHDCNPFPISDVSVAIYNNSTTRKDGYSSLSLHNFGVKSRNFDSVASVSSNKAPKGMEWMLNGDPISLGASDSEFQCMMHNKVGLNTEPQYLNSFALYNSGVLDQQNQHPLMFLNPLDYPRENLQSQKPRGFIDAWSNTGSEESNGNNTNNKSSVASIGKFSLDLSMRGDSVHEDIGTTIDMGLGLMEHNGNNNTQHNDAKTHLSNWLARTPTSTSTWVASTTLGGPLAEVLRLSNANATNDGASNPSSHVITYAESSRSSLETLVSSPSGVLHQTLASFSDSSSNSSPRVASSRTSISDIAMLRFIQK 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0591 556 ProSiteProfiles WRC domain profile. 191 235 IPR014977 -
Lal21g0591 556 SMART QLQ_2 139 175 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal21g0591 556 Pfam WRC 193 234 IPR014977 -
Lal21g0591 556 PANTHER GROWTH-REGULATING FACTOR 7 95 544 - -
Lal21g0591 556 ProSiteProfiles QLQ domain profile. 140 175 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal21g0591 556 PANTHER - 95 544 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lal21g0591 556 Pfam QLQ 140 170 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0591 Lal-Chr21 4425955 4428564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0591 372 532 GRF Transcription Factor Family AT5G53660 33.721 2.48e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lal21g0591 WRC 1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0591 - - lang:109328362 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0591 21 4425955 4428564 Lal21g0591 21 4425955 4428564 ECH
Lal17g0603 17 4328680 4331672 Lal21g0591 21 4425955 4428564 LSH
Lal21g0591 21 4425955 4428564 Lal4g0530 4 3848790 3852396 LSH