Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0573 ATGGCTTTGTCAAACCCACAAACACAAAGATTCATCTTAACCAATAATCTTCATACTCCATCAACTTCCAAAAACACTCACAAAAGTAGAAGTAGTAGTAGTAGTTGTTTTACTACAATTACAAGCAGAAGAAGTAGGTGTTGTTCTGCTATAGCCATTGATGCTCCATCATCTTTGACTGAAGTACCTGGTATAAGATGGGGTTCTATAGCTTTGCAGGGTATGAGAGAAGAAATGGAAGATGATATCATTGTTAAACCTGATAGCTTTCATGGGTTCTCTTTTGCTGCTGTTTTTGATGGCCATGGAGGGGTTTCTTCTGTTCAGTTTCTCAGAGATGAGTTGTACAAGGAGTGTCTTGAAGCTTTACAAGGTGGGTTACTATTAGTTGAGAAAGATTTTAAAGCCATTAAAGAAGCATTAGAGGATGCATTTGTCAAAGCTGACACAAGGTTGTTAAAATGGCTTGAAATGAATCGAGAGGAGGGCGAATCAGGCGCTACAGCAACTGCGGTGTTCATAGGAGATGATAAGCTGCTTGTTTCGCATATCGGTGATTCATCTGTGGTATGCATTATCAGTTCTTATATGTTACATCTAACTCCAGAATTTGATGAAAAAACGTACTTCATATACATTTCTGTGGTTCTATGCAGATCCGGAAAAGCAGAAATGCTGACTAGTCCTCACCGACCGTATGGGAACAGCAAGGCTTCTCTTCAAGAAATCAAAAGAATCAGAGAAGCAGGTGGATGGATATCGAATGGTAGAATTTGTGGAGACATTGCTGTATCTCGTGCATTTGGGGACATGCGATTCAAAACAAAGAAGAATGAGATGCTGCAAAAAGGAGTTCAGGAAGGAAGATGGACAGAAAAATTTATTTCTCGTGTACAGTTCAACAATGACTTGGTTGTTGCATGCCCTGATATATATCAAGTTACACTTGGCTCAGATACAGAGTTTCTAGTATTAGCATCTGATGGTTTATGGGATTACATCAGCAGCTCAGATGCCGTTTCTTTCGTGAGGGATCAACTACGAAAACATGGAAACATTCAGCAAGCTTGTGAAGCACTTGCACAAGCAGCTCTGGACCGGCATACGCAGGATAATGTCAGCATTATAATTGCAGACTTAGGGCGAACAGACTGGCAGAATGTACCACTGCAGCAGCAAAATGTTACCTTTGAGCTTGTCCAAGCTCTTGCTACCATTGGTATTGTCTCAATTGGGATTTGGTTTTCATCTCAGCTTTCTTTATAA 1266 0.4028 MALSNPQTQRFILTNNLHTPSTSKNTHKSRSSSSSCFTTITSRRSRCCSAIAIDAPSSLTEVPGIRWGSIALQGMREEMEDDIIVKPDSFHGFSFAAVFDGHGGVSSVQFLRDELYKECLEALQGGLLLVEKDFKAIKEALEDAFVKADTRLLKWLEMNREEGESGATATAVFIGDDKLLVSHIGDSSVVCIISSYMLHLTPEFDEKTYFIYISVVLCRSGKAEMLTSPHRPYGNSKASLQEIKRIREAGGWISNGRICGDIAVSRAFGDMRFKTKKNEMLQKGVQEGRWTEKFISRVQFNNDLVVACPDIYQVTLGSDTEFLVLASDGLWDYISSSDAVSFVRDQLRKHGNIQQACEALAQAALDRHTQDNVSIIIADLGRTDWQNVPLQQQNVTFELVQALATIGIVSIGIWFSSQLSL 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0573 421 SUPERFAMILY PP2C-like 58 203 IPR036457 -
Lal21g0573 421 CDD PP2Cc 65 380 IPR001932 -
Lal21g0573 421 Pfam Protein phosphatase 2C 68 194 IPR001932 -
Lal21g0573 421 Pfam Protein phosphatase 2C 215 373 IPR001932 -
Lal21g0573 421 PANTHER PROTEIN PHOSPHATASE 2C 57 10 417 - -
Lal21g0573 421 ProSitePatterns PPM-type phosphatase domain signature. 95 103 IPR000222 GO:0043169
Lal21g0573 421 SUPERFAMILY PP2C-like 215 381 IPR036457 -
Lal21g0573 421 ProSiteProfiles PPM-type phosphatase domain profile. 66 380 IPR001932 -
Lal21g0573 421 SMART PP2C_4 56 378 IPR001932 -
Lal21g0573 421 PANTHER PROTEIN PHOSPHATASE 2C 10 417 IPR015655 GO:0004722|GO:0006470
Lal21g0573 421 MobiDBLite consensus disorder prediction 14 34 - -
Lal21g0573 421 Gene3D - 65 387 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0573 Lal-Chr21 4257514 4261476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0573 1 357 PP2C-type Phosphatase Gene Family AT4G27800 56.983 7.23e-139 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0573 K04457 - gmx:100784071 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0573 21 4257514 4261476 Lal21g0573 21 4257514 4261476 ECH