Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0563 ATGATGGATTGCAACAAAGATGAGGCACTTAGGGCTAAAGAAATAGCAGAGAGGAAATTTTCTGAAAGGGAATATGTTGGGGCAAAGAAGTTTGTTCTCAAGGCTCTAAATCTATATCCTGCATTGGAGGATCTTTCCCAGTTTTTGACTACTGTTGATATTTATATCTCTGCCGAGAATAAAATAAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTTAGCCCCTTTGCTGATGATGAGACTGTTAGAAAGCAGTACAGGAAGTTGGCTCTCACTCTTCATCCGGACAAAAACAAGACTTTAGGCGCAGAGGGTGCATTTAAGTTGGTTTCTGAGGCATGGAGTTTTCTATCAGATAAGACCAAGAGATTAGCATATAACCAGAAGCGGACTGGAAATAATCCCAATCATGTCGGATCTCAATCAGCTGCACCCAGTTCAAATGATATTTATAATTTTAAGAAGAATGTAACTTCAAATGTGAGGACTGGAACTAATGCTCGGGCACCTTCAGCTTCAGTTCCTCCTCCGCAGAAAAGGGCTGAAACCTTTTGGACTATCTGTAATCAGTGTAAGACGCACTATGAATATCTCAAGGTTTACTTGAATCAGACCCTTTTATGTCCCAACTGTAATGAAGCTTTTAAGGCTGTTGCGAGGAGTCCCCCTCCCAATGTTTTCAAATCACCAAATTGGTCCTCTCGTCAACAGCATCAGAATGCTCGACATCATGCTGGAACTAATAACACAGATGTTCAGTGGGATTCTCACAGGTCATCATCTGTTGCTGCTCAAATTGTGCAGCAGGCAAGTGAGAAAGTGAGGAGAGAGGGAGCACCGTCATTTTCTGAATGGGAGAGGAAGAGTGCTGATGGTTTGAAGAAAAGGAGGACAGATAATATTCACATGAATGGTTATCAAGGGCACATGGCAAATCATACGGGAATGGGACATGGAGCAGCCGGTGTGGGCAGTTTTTCTGCTCCAGGAAAGGCCAACATGGAAACACAAAGGAATTATGGTTTTTCAGGTGTTACTGGCAAGCATAACAGCACAAGAGAGTTGTCAATGTTTGAACTGCGAAACATGTTGATGGATAAGGCAAGGATTGATATTCGTAAGAAATTTAAAGAATGGAGATCAGTGGCTGAAGCTAAGAGTACCAACAAAGACAGAGGGAATAAGAGACCGAGAAGTACATTTAATGACAAAGCCAGTTCAGAGAAGCATGTAGAGTCCACTGATAATGGTAACAAGCGTCTGGTCGTTGATTCTTTCCCTGTCACATCTGATGATACAGTTGAGACGAGCCAAGCCTATGTCACAATCAATGTTCCAGACCCTGATTTTCACAATTTTGACTTGGATAGATCTGAAAATGCCTTTGAGGATGACCAAGTCTGGGCTGCTTACGATGATGACGATGGAATGCCTCGATATTATGCTAGAATTCACAAGGTGATATCCACAAATCCATTTAAAATGCAGATCAGTTGGCTTAACTCTCGAAGCAACAGTGAATTGGGCCCAATAGATTGGATAGGCTCTGGATTTTATAAAACTTGTGGGGATTTCAGGGCCGGTAAGCATGAACTATCTGAGTCATTAAATTCATTTTCACACAAGGTTAGGTGGACAAAAGGCAACCGAGGAGTTATTCACATCTTTCCTGGAAAGGGCGAAATCTGGGCACTTTATCGAAACTGGTCTCCTGATTGGAATGAACAGACTCCAGATGAAGTGATACACAAGTATGATATGGTGGAGGTACTTGATGATTTCAGTGAGGAGCAAGGTATAATAGTTACTCCCCTTGTTAAAGTTGCTGGTTTCAGGACAGTGTTTCAGAGGCACATGGACCCCAATCAGGTGAGAAGGATTCGCAAAGAGGAGATGTTTCGATTCTCTCATCAGGTTCCTAACTACTTGCTTACTGGCCAGGAAGCTCCTAATGCGCCAAAGGATTGTCGAGAGTTGGATCCAGCTGCTACTCCTTTAGAACTCCTTCAGAAAATGACAGAAGCTGATGAGACATCGCCGGATAATGTTTAG 2055 0.4253 MMDCNKDEALRAKEIAERKFSEREYVGAKKFVLKALNLYPALEDLSQFLTTVDIYISAENKISGEMDWYGILGVSPFADDETVRKQYRKLALTLHPDKNKTLGAEGAFKLVSEAWSFLSDKTKRLAYNQKRTGNNPNHVGSQSAAPSSNDIYNFKKNVTSNVRTGTNARAPSASVPPPQKRAETFWTICNQCKTHYEYLKVYLNQTLLCPNCNEAFKAVARSPPPNVFKSPNWSSRQQHQNARHHAGTNNTDVQWDSHRSSSVAAQIVQQASEKVRREGAPSFSEWERKSADGLKKRRTDNIHMNGYQGHMANHTGMGHGAAGVGSFSAPGKANMETQRNYGFSGVTGKHNSTRELSMFELRNMLMDKARIDIRKKFKEWRSVAEAKSTNKDRGNKRPRSTFNDKASSEKHVESTDNGNKRLVVDSFPVTSDDTVETSQAYVTINVPDPDFHNFDLDRSENAFEDDQVWAAYDDDDGMPRYYARIHKVISTNPFKMQISWLNSRSNSELGPIDWIGSGFYKTCGDFRAGKHELSESLNSFSHKVRWTKGNRGVIHIFPGKGEIWALYRNWSPDWNEQTPDEVIHKYDMVEVLDDFSEEQGIIVTPLVKVAGFRTVFQRHMDPNQVRRIRKEEMFRFSHQVPNYLLTGQEAPNAPKDCRELDPAATPLELLQKMTEADETSPDNV 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0563 684 Pfam DnaJ domain 67 128 IPR001623 -
Lal21g0563 684 MobiDBLite consensus disorder prediction 278 292 - -
Lal21g0563 684 Gene3D DnaJ domain 64 170 IPR036869 -
Lal21g0563 684 MobiDBLite consensus disorder prediction 229 292 - -
Lal21g0563 684 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Lal21g0563 684 MobiDBLite consensus disorder prediction 229 269 - -
Lal21g0563 684 PANTHER HEAT SHOCK PROTEIN-LIKE 2 678 - -
Lal21g0563 684 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lal21g0563 684 CDD DnaJ 67 120 IPR001623 -
Lal21g0563 684 SMART dnaj_3 66 123 IPR001623 -
Lal21g0563 684 MobiDBLite consensus disorder prediction 382 418 - -
Lal21g0563 684 PANTHER BNAC03G44070D PROTEIN 2 678 - -
Lal21g0563 684 MobiDBLite consensus disorder prediction 382 419 - -
Lal21g0563 684 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lal21g0563 684 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lal21g0563 684 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lal21g0563 684 Pfam Domain of unknown function (DUF3444) 443 649 IPR024593 -
Lal21g0563 684 SUPERFAMILY Chaperone J-domain 58 127 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0563 Lal-Chr21 4149657 4151711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0563 5 224 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.579 2.31e-27 112