Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0559 ATGGGAAGGTGTTGGTTTCTTGAGTTGTTAGTTGTAGGAACCTATGTTTGGTTGGTTATTAATAATGTTGGGGTTGAAGGGTACCCTACAGAGGATCTAGTGAAGAGGTTACCTGGGCAACCCAAAGTTGAGTTCAAACAATATGCAGGGTATGTTGACATAGATGTCAAACATGGAAGAAGCTTGTTCTACTATTTTGTGGAAGCTGACCATGACCCTGATAATAAGGCACTAACCCTTTGGCTCAATGGAGGTCCAGGATGTTCATCCATTGGAGGAGGTGCCTTTACTGAATTGGGCCCCTTTTATCCTAAAGGCAATGGACGTGGTCTCAGAAAAAATTCAATGTCTTGGAATAGAGGCCTCAGGGTTTTGCAGCCACACCTTCCAGATACATCACAAACATCCAACCTTCTCTTTATCGAATCTCCTGCTGGAGTTGGTTGGTCATACTCAAATACAACTTCAGATTATAACACTGGTGATGTATCCACAGCCAATGATATGGTTTTGTTCTTCCTGAAATGGTATGAGAAGTTTCCATCCTATAGATCAAGGGAACTGTTCCTTACTGGAGAAAGCTATGCAGGACATTACATACCACAATTAGCTAATGCTATTCTGGACTACAATGCTCATTCAACTGATTTCAAATTCAATATCAAAGGAATTGCTATTGGAAACCCACTTCTAAAACTTGATCGTGATACACAAGCAACATATGAATATTTCTGGTCACATGGAATGGTTTCTGATGAAATTGGCATTGCCATTATGAATGATTGTAATTTTGATGATTATGTTTTTGAAGATCCTCACAATATATCTAAATCATGCAATGATGTCATAAATGAAGCAAATGAAATTGTTGGTGAATATATAAACAACTATGATGTGATTCTGGATGTTTGTTATCCATCCATAGTTGAACAAGAACTGAGATTGAAAAAAATGGCTACTAAAATAAGTGTAGGGGTAGATGTGTGTATGACTTTTGAAAGAAGATTTTACTTAAACACCCCTGAGGTCCAAAAAGCTCTTCATGCAAACAGAACAAATCTTCCTTATCCCTGGTCCATGTGTAGTGGTGTTTTAAACTATAACGAAACTGATCCTAACATCAATATTCTTCCAATTCTGAAAAGGATAGTTGAAAATCATATTCCAGTATGGGTTTTCAGTGGAGACCAAGATTCGGTAGTGCCATTAATGGGTTCTCGAACACTGATTCGTGAACTAGCTCATGACCTCAAGTTGAAGGTTACAGTCCCATATGGAGCTTGGTTCCACAAAGGCCAGGTTGGAGGTTGGGTAACAGAGTATGGAAATTTATTGACTTTTGCAACTGTAAGAGGAGCTGCTCACATGGTACCTTATGCACAACCTTCAAGAGCACTTCATCTATTCACTTCTTTTCTGCATCGAAGGAGGTTGCCAAATTCAACTAACTTTCAATAA 1458 0.3868 MGRCWFLELLVVGTYVWLVINNVGVEGYPTEDLVKRLPGQPKVEFKQYAGYVDIDVKHGRSLFYYFVEADHDPDNKALTLWLNGGPGCSSIGGGAFTELGPFYPKGNGRGLRKNSMSWNRGLRVLQPHLPDTSQTSNLLFIESPAGVGWSYSNTTSDYNTGDVSTANDMVLFFLKWYEKFPSYRSRELFLTGESYAGHYIPQLANAILDYNAHSTDFKFNIKGIAIGNPLLKLDRDTQATYEYFWSHGMVSDEIGIAIMNDCNFDDYVFEDPHNISKSCNDVINEANEIVGEYINNYDVILDVCYPSIVEQELRLKKMATKISVGVDVCMTFERRFYLNTPEVQKALHANRTNLPYPWSMCSGVLNYNETDPNINILPILKRIVENHIPVWVFSGDQDSVVPLMGSRTLIRELAHDLKLKVTVPYGAWFHKGQVGGWVTEYGNLLTFATVRGAAHMVPYAQPSRALHLFTSFLHRRRLPNSTNFQ 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0559 485 SUPERFAMILY alpha/beta-Hydrolases 31 478 IPR029058 -
Lal21g0559 485 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 481 IPR001563 GO:0004185|GO:0006508
Lal21g0559 485 Gene3D - 376 474 - -
Lal21g0559 485 Pfam Serine carboxypeptidase 39 474 IPR001563 GO:0004185|GO:0006508
Lal21g0559 485 Gene3D alpha/beta hydrolase 29 305 IPR029058 -
Lal21g0559 485 ProSitePatterns Serine carboxypeptidases, serine active site. 190 197 IPR018202 GO:0004185
Lal21g0559 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Lal21g0559 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 176 201 IPR001563 GO:0004185|GO:0006508
Lal21g0559 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 445 458 IPR001563 GO:0004185|GO:0006508
Lal21g0559 485 PANTHER CARBOXYPEPTIDASE 9 481 - -
Lal21g0559 485 Gene3D - 329 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0559 Lal-Chr21 4110856 4115603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0559 335 473 Calmodulin-binding Proteins AT2G22960 23.741 5.01e-09 54.3