Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0551 ATGCTAATAAGATATCAAATACTCCTGAGGAGAGTTCTTACTTTCCATCCAAGTGGTGTTCTAACTAGTGATCTCTCTTCAAGCCAAAAAATGGACAAGAAGCTGAGCCTCTTGTTCATTTTCTCAGCAATCTTCATGATGGGATTAATGTTCTTAGGTGTTGGAGCTGAGCCAGTGAAAGATAAGCAAGCTTTGCTTGATTTCCTTCACAACATGCACCATGACTCTTCTCATCTAAATTGGGATGCAACCTCCTCTGTATGCCAAAGCTGGAGGGGAGTGACCTGCAACACTGACAAATCAAGGGTTATAGCCCTTAGATTACCTGGAGCTGGGTTGAGTGGTCCAATCCCAACCAACACTCTTAGTCTCCTCTCAGCACTTGAAACTTTGAGTCTCAGATCAAATGGTATAACTGGTCCTTTCCCTTCTGATTTTTCTGAGCTAAAAAATTTAACCACCATCTATCTCCAATTTAACAAGTTTTCAGGTCCACTGCCAATAAATTTTTCAGTTTGGAATAATCTTACCATTATCAATTTATCCAACAACTCTTTTAATAAGAGCATTCCTTTTTCAATATCAAGTTTGACTCATCTCACTTCACTAGTTCTTGCCAACAACTCACTTTCTGGTGAAATTCCTGATCTTAATAGTCCTAGCCTGCAAGAGCTAAATTTAGCCAACAATAACCTTAGTGGGGTGGTGCCGAAACCCCTTCTTAAATTTCCAAGTTCAGCCTTTGCTGGTAACAATCTTACCTTTGCATCTGCACTTGCTCCAGCTTTACCTGCGAAACCACCAAATGCCCAACCGCCAAAGAAAACTAGAAGAATTAGTGAACCTGCATTGTTGGGTGTCATCATTGGTGGTTGTATTCTGGCATTTTTGCTGGTTGCGGCTTTCATGGTCGCATCCTGGTATGGCAAAGAAGATGCAGATGGGAAACCAGTTAAGTCCCAAAAGAAAAAGGCAGTCTCTATAAAAAAAGAAGCTTTTGAAAATAAAAAGTCTCAAGACAAAAACAAAATTGTCTTCTTTGAGGATTGCTATCTTGCATTTGACTTAGAGGACCTGCTGAGAGCGTCTGCCGAGATTCTCGGAAAGGGTACCTTCGGTATGACATATAAGGCTGCTCTAGATGATGTAACCACTGTGGTGGTGAAGAGGTTGAAGGAAGTCACAGTTGGAAAACGAGAGTTTGAGCAGCATATGGAGGTGGTGGGGAAAATTAAGCATGACAACGTGGATGCATTAAAGGCATATTTTTATTCAAAGGAGGAGAAACTAATAGTATATGAATACTATCAACAAGGCAGCATTTCTGCAATGCTGCATGGAATGGGTGAGGATCCACTTACTCCAAGAGTAAGCAGAAGTGGGGAAGGCAGGAGTTTTTTAGACTGGGACAGCCGCTTGAGAATTGCGATTGGCGCAGCAAGAGGTATTGCTCACATCCATGCTCAACTTGGAGGGAAACTCATTCATGGAAACATAAAAGCCTCAAACATCTTCCTCAACTCACAAGGATATGGTTGTATATCCGATATCGGTTTCGCAACACTGATGAATCCGATATCCCCGTCAGCAATGAGAGTAGCAGGATACCGTGCTCCAGAAATAATAGACAGCCGAAAAGCAACTCATGCATCTGATGTCTACAGTTTTGGGGTCCTGCTACTTGAGCTTCTAACTGGTAAATCCCCGGTATACACAAGAAGTGAGGAAGTTGTCCCCTTGGTTAGATGGGTGAATTCTGTGGTCAGAGAGGAGTGGACTGCAGAAGTGTTTGATGTACAGCTGTTGAGGTATCCAAATATAGAGGAAGAAATGGTAGAGATGCTACAATTAGGGTTGGCTTGTGCAGCAAGAGTACCAGATCAGAGACCAAAAATTCAAGACGTGGTGATAAGAGTGGAGGAAATTCGTCGTGTAAATACTGGAAATCGACCATCTAGCGAGTCTAGATCAGAAGTTTCTACCCCAACTCCTTACCCCTCAACCTCACCTCATGCAAATTGA 2022 0.4233 MLIRYQILLRRVLTFHPSGVLTSDLSSSQKMDKKLSLLFIFSAIFMMGLMFLGVGAEPVKDKQALLDFLHNMHHDSSHLNWDATSSVCQSWRGVTCNTDKSRVIALRLPGAGLSGPIPTNTLSLLSALETLSLRSNGITGPFPSDFSELKNLTTIYLQFNKFSGPLPINFSVWNNLTIINLSNNSFNKSIPFSISSLTHLTSLVLANNSLSGEIPDLNSPSLQELNLANNNLSGVVPKPLLKFPSSAFAGNNLTFASALAPALPAKPPNAQPPKKTRRISEPALLGVIIGGCILAFLLVAAFMVASWYGKEDADGKPVKSQKKKAVSIKKEAFENKKSQDKNKIVFFEDCYLAFDLEDLLRASAEILGKGTFGMTYKAALDDVTTVVVKRLKEVTVGKREFEQHMEVVGKIKHDNVDALKAYFYSKEEKLIVYEYYQQGSISAMLHGMGEDPLTPRVSRSGEGRSFLDWDSRLRIAIGAARGIAHIHAQLGGKLIHGNIKASNIFLNSQGYGCISDIGFATLMNPISPSAMRVAGYRAPEIIDSRKATHASDVYSFGVLLLELLTGKSPVYTRSEEVVPLVRWVNSVVREEWTAEVFDVQLLRYPNIEEEMVEMLQLGLACAARVPDQRPKIQDVVIRVEEIRRVNTGNRPSSESRSEVSTPTPYPSTSPHAN 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0551 673 Pfam Protein tyrosine and serine/threonine kinase 365 636 IPR001245 GO:0004672|GO:0006468
Lal21g0551 673 Gene3D Phosphorylase Kinase; domain 1 325 435 - -
Lal21g0551 673 PANTHER OS05G0588300 PROTEIN 45 665 - -
Lal21g0551 673 SUPERFAMILY L domain-like 78 242 - -
Lal21g0551 673 Gene3D Ribonuclease Inhibitor 59 174 IPR032675 -
Lal21g0551 673 SUPERFAMILY Protein kinase-like (PK-like) 365 647 IPR011009 -
Lal21g0551 673 MobiDBLite consensus disorder prediction 648 673 - -
Lal21g0551 673 Pfam Leucine rich repeat N-terminal domain 60 97 IPR013210 -
Lal21g0551 673 PANTHER LRR RECEPTOR-LIKE KINASE 45 665 - -
Lal21g0551 673 ProSiteProfiles Leucine-rich repeat profile. 221 242 IPR001611 GO:0005515
Lal21g0551 673 MobiDBLite consensus disorder prediction 646 673 - -
Lal21g0551 673 ProSitePatterns Protein kinases ATP-binding region signature. 367 398 IPR017441 GO:0005524
Lal21g0551 673 ProSiteProfiles Protein kinase domain profile. 361 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0551 673 Gene3D Transferase(Phosphotransferase) domain 1 439 660 - -
Lal21g0551 673 Gene3D Ribonuclease Inhibitor 175 260 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0551 Lal-Chr21 4022748 4030892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0551 50 663 Receptor kinase-like Gene Family AT4G23740 51.577 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal21g0551 PK_Tyr_Ser-Thr 6.5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0551 - - gmx:100813065 863.988