Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0541 ATGGTGCCTCCGGGGCCACCCACTCCTATTGGCGGTGCCCTGTCTGTCAACGCTTCTCTTTTGAGATCAAATTCAGGGATGCTAGGAGGTCAAGGAGGTCCTATGCCTTCACAAAATTCTTTCCCTTCGCTTGTGTCGTCGCATACTCAGTTCAACAACATGAATATTCTGGGAAATATGTCCAATGTAACTTCCACACTGAATCAATCTTTCCCAAATGGAGTCCCAAGTCATGGGCTTTCAGGTGCAGGAAGTAGCCAGCGTGGAGTGGTTTATACTGGAGCTGAGACAGATCCACTCTCCAGTGTTGCCAATGGAATGAATTTCAGTAATTCTTCATCCTCATTTCTCCAAGCAAATATGGTGAATGCTGGTGGTTCTTCTGGTGTAGGTCAGGGTCAACAATTTTCAAACCCTTCAGGTAATCAACTGCTGTCAGATCAACAGCATTCCCAACAGGTTGAGCCTCAACTTTTCCAACATAGTCAGCAGTCAATGCAGCAGCTCTCTGCTCCTCTGAATACACAACAGCACTTTCAATCAATGCGAGGAGCGATAGGTGGTATAGGATCAGTAAAGTTGGAGTCCCAGGTAAATAATGATCAACTCGGGCAGCAGCAGCAACAGCAGTTGCAATCATTGAGGAGTGTTCCTCCGGTTAAATTGGAACCGCAACAACTTCAACCAACGAGAAGTCTTCCACCAGTAAAAATGGAGCCCCAACATTCTGATCAACCATTATTTTTGCATCAGCAACAGCAGCAACAACAGCAGCAGCAATTCCTCCACATGTCTAGGCAACCATCTCAGGCTGCTGCTGCTCAGTTTAATATTTTGCACCAACAGAGGCTTTTGCAATTACAGCAACACCAGCAGCAACTCTTGAAGACAATGCCTCAACAACGGCCTCAATTACCACAGCAATTTCAACAGCTGAATATGCCTATTAGGTCTCCTGTGAAACCATCATATGAACCTGGGATGTGTGCTAGGCGGCTGACACATTACATGTATCAGCAACAGCATAGGCCTGAAGACAACAATATTGAGTTCTGGAGGAAGTTTGTTGCTGAGTATTTTGCTCCTAATGCCAAAAAGAAATGGTGTGTTTCTTTGTATGGAAGTGGAAGACAAACAACTGGAGTTTTCCCTCAGGATGTATGGCACTGTGAAATATGCAATCGCAAACCTGGGCGTGGGTTTGGTAATATTTCTTTGTTCATTGTACTTTTGGTTCTTCATCAGCTGAATGTTGGCATCTTGACCTTTTCCGAAATATGTGATCTAGAAGCAACTGTTGAGGTTCTTCCCAGGCTTTACAAAATAAAGTATGAAAGTGGTACTTTAGAAGAGCTGCTTTATGTTGACATGCCACGCGAATATCATAATTCCTCTGGCCAGATTGTTCTAGATTATGCAAAAGCAATACAGGAAAGTGTCTTTGAGCAACTTCGAGTTGTTCGTGATGGTCAACTTCGAATAGTTTTTTCTCAAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGACATGAAGAGCTCATCCCCAGAAGATTGTTAATACCTCAGGTTAGTCAGCTTGGAGCGGTTGCTCAAAAATACCAGTCTTTTAGTCAAAGTGCCACACCAAATATATCTGTTCCAGAGTTACAAAATAATTGCAATATGTTTGTCGCATCAGCCCGTCAGCTGGCTAAATCTTTAGAAGTTCCATTAGTTAATGATTTAGGATATACAAAGAGATATGTGCGCTGCCTACAGACCTGTGAGGCTGTGACAGTGGGTTTGGATGTTGTGGGCTTGGCTGTGGCAGATATATCGGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCCGAGAAACAGTGACTGGACCTATGGAGAGCTTAGCCAAATTCCCTCGCAGAAATAGTGGTTCAGCTGGACCTCGTGGTCAAGCACAACAGCATGAGGATCAATTACAGCAACAGAAATTTTTGGGTCATAACTCAAATGGTGATCAAACTTCATCTTCACAACCCAGTGCCACCCAATTTTCTTCTAACAACGGTATGGTTAGTGTAAATAACTCTGTTAGCTCAGCACCTGCATCAACCACCACAAGCACTATCGTTGGACTTCTCCACCAAAACTCTATGAATTCTAGACAAAATTCAATGAACAATGCAAGCAGTCCATATGGAGGTAGCTCTGTTCAGATTCCATCCCCGGGTCCCTCTAGTACTATGCCACAAGCCCAACCAAACCTATCCCCTTTTCAAGCACCAACACCATGTTCATCTAACAACCCCCAACAAACACCTCACCCTTCCTTAACTTCTGCCAATCACATGAGTACAACAAACTCACCTGCTAATATTTCAATGCAACAACAGCAGCCATCTCTTTCTGGTGAAGCTGACCTTACCGATGCTCAGAGCTCAGTCCAGAAAATCATACATGAGATGTTCATGTCATCTCAGATGAATGGCACAGGTGGGATGGTTGGTGTTGGATCTCTTGGAAATGATATGAAAAATGTAAATGGTGTTCTGCCAATGAGCACCAATGCAGGGATGAACAGTGGCAATGGCCTGATGGGCAACGGTGCACTGAACACTAATTCAGGCGTCGGGGTTGGAAGTTACAGGACAATGAATTTTGGTCAATCTACTATGGCTAATGGAATGAGAGCTGCTATGGGAAATAATTCAGTCATGAATGGAAGAGGAGGAATGGCATCCATTGCTCGGGATCAAGCTATGAATCATCAACAAGATCTGTCAAATCAACTACTTAGCGGGCTAGAAGCTGTAAACGGTTTTAGTAATCTCCAATTTGATTGGAAACCATCTCCATGA 2847 0.4373 MVPPGPPTPIGGALSVNASLLRSNSGMLGGQGGPMPSQNSFPSLVSSHTQFNNMNILGNMSNVTSTLNQSFPNGVPSHGLSGAGSSQRGVVYTGAETDPLSSVANGMNFSNSSSSFLQANMVNAGGSSGVGQGQQFSNPSGNQLLSDQQHSQQVEPQLFQHSQQSMQQLSAPLNTQQHFQSMRGAIGGIGSVKLESQVNNDQLGQQQQQQLQSLRSVPPVKLEPQQLQPTRSLPPVKMEPQHSDQPLFLHQQQQQQQQQQFLHMSRQPSQAAAAQFNILHQQRLLQLQQHQQQLLKTMPQQRPQLPQQFQQLNMPIRSPVKPSYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSLYGSGRQTTGVFPQDVWHCEICNRKPGRGFGNISLFIVLLVLHQLNVGILTFSEICDLEATVEVLPRLYKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSQDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQSFSQSATPNISVPELQNNCNMFVASARQLAKSLEVPLVNDLGYTKRYVRCLQTCEAVTVGLDVVGLAVADISEVVNSMKDLIDYSRETVTGPMESLAKFPRRNSGSAGPRGQAQQHEDQLQQQKFLGHNSNGDQTSSSQPSATQFSSNNGMVSVNNSVSSAPASTTTSTIVGLLHQNSMNSRQNSMNNASSPYGGSSVQIPSPGPSSTMPQAQPNLSPFQAPTPCSSNNPQQTPHPSLTSANHMSTTNSPANISMQQQQPSLSGEADLTDAQSSVQKIIHEMFMSSQMNGTGGMVGVGSLGNDMKNVNGVLPMSTNAGMNSGNGLMGNGALNTNSGVGVGSYRTMNFGQSTMANGMRAAMGNNSVMNGRGGMASIARDQAMNHQQDLSNQLLSGLEAVNGFSNLQFDWKPSP 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0541 948 MobiDBLite consensus disorder prediction 201 216 - -
Lal21g0541 948 MobiDBLite consensus disorder prediction 629 699 - -
Lal21g0541 948 MobiDBLite consensus disorder prediction 127 172 - -
Lal21g0541 948 MobiDBLite consensus disorder prediction 716 808 - -
Lal21g0541 948 Pfam LIM-domain binding protein 332 632 IPR029005 -
Lal21g0541 948 MobiDBLite consensus disorder prediction 201 241 - -
Lal21g0541 948 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 404 - -
Lal21g0541 948 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 429 947 - -
Lal21g0541 948 MobiDBLite consensus disorder prediction 643 699 - -
Lal21g0541 948 PANTHER LIM DOMAIN-BINDING PROTEIN 1 404 IPR029005 -
Lal21g0541 948 PANTHER LIM DOMAIN-BINDING PROTEIN 429 947 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0541 Lal-Chr21 3938487 3947144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0541 1 944 C2H2 Transcription Factor Family AT1G43850 56.275 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0541 - - gmx:100787573 1339.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0541 21 3938487 3947144 Lal21g0541 21 3938487 3947144 ECH
Lal21g0541 21 3938487 3947144 Lal4g0449 4 3135113 3145840 LSH