Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0540 ATGTCGTTAGTTAGACCTGCAAAGCTAGTTCCTACATCATATAAAAATGGCAAGATCTACACACTAAAGGGAACTGAAGTTACATCTGGCTTGTCATCCCAAATTTATGGTCCTGAAAAGCAAAGAAGCATGTACATGACAGATGACGACTCGGTTGAGAGTTACGAGAAGTACTTCCAAGACTCATCAACAGAACTGATAGAACCATCTAGTTCCAGCATCTCTGGAAGTTCAATTCACCCTGATGGTGCCTCTTCTTACGAGCTAAGAGCTAGTTTGGTGACTCCTACTTCTTTTGTCTCTGCGAGGCATCAAGATGCCTATCAGTCCAATTTCGGATCAGATTTCTTGGAAAATGGAAGCCTTGATTCGCTTGATGTCGATGGTCTAATGAAATTAAAACTACAAGCATTGGAGAGGGCGTTGCTTGATGATAGTGATGCTGAGGAAGAGGAAGAAGCCATATTTGGTACTGCCCAAAGCATGGAAATCGATCCGAATATTGCTGAATGGGCTGATCCTATTCAGAGTATTCAACTCGAAGACTCACCAAAGGAGTCTTCATCTTCAGGTTCCAACCTTAGCAGCATTAGCGTCACCAAAGAAATATCACGAATTTCTCAAACCCCCAAGCAACTGCTTTATGAATGTGCTGTTGCACTTTCAGAAGGAAACGAAGAGGAAACCTTATCTAGGATAAATGGTCTCCGCCAAATGGTCTCAATTCAAGGAGAGCCTTCACAAAGAATTGCAGCCTATATGGTGGAGGGACTTGCAGCTCGCCTCGCTGAATCGGGGAAAGGTCTTTATAAAGCTCTGAAATGCAAAGAACCTCCGTCTTCAGACCGTCTCGCAGCCATGCAGATACTGTTTGAGGTTTGCCCATGTTTTAAATTTGGATTTATTGCTGCAAACAATGCAATTATAGAGGCAACTAAAGATGAGTTGAATGTTCACATAATAGATTTTGAGATCAATCAAGGTAGTCAATACATAAATCTAATACAACAACTTGCCTCGAGGTCCAATAAGCCACCTCGTGTTAGATTGACTGGAGTCGATGATCCCGAGTCTGTGCAAAGATCTGTTGGAGGCCTAAATATCATTGGACAAAGACTTGAAAAACTGGCAGAAACACTTGGTTTGCCATTTGAGTTTCGGGCAGTGGCATCGAGGACTTCCCTTGTCACCCCACCAATGCTCAATTGTCATCCTGGCGAAACACTTGTAGTGAACTTTGCATTCCAGCTTCATCACATGCCTGATGAGAGTGTTTCGACTGTAAATGAACGAGATCAACTTCTCCGCTTGGTAAAGAGCTTGAGCCCGAAGCTTGTAACAGTCGTGGAGCAAGATGTGAACACTAACACCACCCCTTTCTTACCAAGATTTTCCGAAGCCTACAAATACTACTATGCTGTGTTTGAGTCGCTTGATATTACGCTTCCTAGGGAGAGTCAAGACAGGCTGAATGTTGAAAGGCAATGCTTAGCAAGAGATATTGTTAATGTTGTTGCATGTGAAGGTGAGGATAGGATAGAACGGTATGAAGTCGCTGGAAAATGGAGGGCAAGGATGAAAATGGCTGGCTTTGTTTCATCCCCGATGAGCGCGAATGTGACCGCTGAAATCCGAAATCTCATTAAGATGTACGGCGACAGGTTCATAATAAAGGAGGAGATGGGAGCACTTCATCTTGGGTTGGAAGACAAAAACTTGATTGTTGCTTCTGCATGGAAGTGA 1743 0.4332 MSLVRPAKLVPTSYKNGKIYTLKGTEVTSGLSSQIYGPEKQRSMYMTDDDSVESYEKYFQDSSTELIEPSSSSISGSSIHPDGASSYELRASLVTPTSFVSARHQDAYQSNFGSDFLENGSLDSLDVDGLMKLKLQALERALLDDSDAEEEEEAIFGTAQSMEIDPNIAEWADPIQSIQLEDSPKESSSSGSNLSSISVTKEISRISQTPKQLLYECAVALSEGNEEETLSRINGLRQMVSIQGEPSQRIAAYMVEGLAARLAESGKGLYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFIAANNAIIEATKDELNVHIIDFEINQGSQYINLIQQLASRSNKPPRVRLTGVDDPESVQRSVGGLNIIGQRLEKLAETLGLPFEFRAVASRTSLVTPPMLNCHPGETLVVNFAFQLHHMPDESVSTVNERDQLLRLVKSLSPKLVTVVEQDVNTNTTPFLPRFSEAYKYYYAVFESLDITLPRESQDRLNVERQCLARDIVNVVACEGEDRIERYEVAGKWRARMKMAGFVSSPMSANVTAEIRNLIKMYGDRFIIKEEMGALHLGLEDKNLIVASAWK 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0540 580 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 11 579 IPR030011 GO:0003700|GO:0005634
Lal21g0540 580 Pfam GRAS domain family 211 580 IPR005202 -
Lal21g0540 580 ProSiteProfiles GRAS family profile. 201 580 IPR005202 -
Lal21g0540 580 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 11 579 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0540 Lal-Chr21 3935646 3937388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0540 1 580 GRAS Transcription Factor Family AT1G21450 59.797 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal21g0540 GRAS 4.7e-129 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0540 - - gmx:100798897 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0540 21 3935646 3937388 Lal21g0540 21 3935646 3937388 ECH