Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0532 ATGCAACAAGGTCTTGCCGGAGAAGCCTCCTGCGGTGGCCGGACGGTGGTGGTGGGGATGAAGCTGGACTCTCCAAGCAAAGAGTTATTAACGTGGGTTTTGGTCAAAGTTGCTCAACCTGGTGATACTGTTGTTGCTTTGCATGTTCTTGTCAACCATGAAATTATGAATTTAGATGGGAAATCGTCGTTGATTTCGCTTGTTACTGCGTTTAACCCTGTTCTTGCTGTTTGTGAAGGATTCTGCAATTTGAAACAGGTGGATCTCAAACTGAAAATTTGTAAAGGTTCATCAGTGAAGGAAATTTTGGTTCGGGAAGCGAATGCTTATGCTGCAACGCATGTTATGGTGGGAATTTCTCAAGCCCACCATAAAATCTGGTCATCTAAATCTGTAGCCAAGTACTGTGCTAGAAAGCTATCCAAGAATTGCTGTGTTTTTGCTGTTAACAATGGGAAAGTTGTGTTCAAGCGCATTCGTGATGCTTCACCACTAAATGATGGTGCTTCCGACTTGCAAGGGATTGATTGTCATTACAGAAATGGTTTGCTTGGTTTGACTGAATGGCCACTCAGTAAGAGTTCAGAAGTACTAAGTGATGATACTGCAAGCATGGGCGTTGATAAGGGTTCTGGCAAAATCTCGGATCACAGTTTTGCCAAGGTTTTGCTGGATTCTACAGAAAATGTTAGAAGGCAAAGCTGCTCAGTTTGTGGTTCAACCCTGGCATTGCTAAATACTTCTTCCCACCAATCTGCAGAAGAGTCTTCCGGTCAAGGTGGCAGTGAGAACTCTTTGGCTATAGTGCCTGTAAAGACCACTGATGCAAGTCAACTTGAATTGGTACCGGGTTGGCCACTATCACACCGGGAAATTTTATCAGACAGGCAACCTCTTGACCTATCATCGCTGCACCAGATATCTGTGGTCCCGTGGGCAATGAGGTTGCCCTGTAAACGTCTTTCATATTATGCATATCATGATCATAGATCGAAAAGTTGTGATCGAGGTCATGATCATTCTGTGGCTTTAGATAGCAAGAGTGGTGCTCTTGTTCCAGTGGATGCTGAGATAGTTACTGCTTATTCGCCTGAACGAAATTCAATAAGTATTCCAAGAGAATTGGGAAGCCTTCATGATAAATACTCAGCTACTTGCAGATTGTTTGAGTACCGAGAACTTGTTTCAGCAACATCAAATTTCTTGCCTGGTGTGTTTCTCAGTACTGGTTTGGCTAAATTCAATTTAACGCAACTGGTTTACTCCTTTTAA 1272 0.4308 MQQGLAGEASCGGRTVVVGMKLDSPSKELLTWVLVKVAQPGDTVVALHVLVNHEIMNLDGKSSLISLVTAFNPVLAVCEGFCNLKQVDLKLKICKGSSVKEILVREANAYAATHVMVGISQAHHKIWSSKSVAKYCARKLSKNCCVFAVNNGKVVFKRIRDASPLNDGASDLQGIDCHYRNGLLGLTEWPLSKSSEVLSDDTASMGVDKGSGKISDHSFAKVLLDSTENVRRQSCSVCGSTLALLNTSSHQSAEESSGQGGSENSLAIVPVKTTDASQLELVPGWPLSHREILSDRQPLDLSSLHQISVVPWAMRLPCKRLSYYAYHDHRSKSCDRGHDHSVALDSKSGALVPVDAEIVTAYSPERNSISIPRELGSLHDKYSATCRLFEYRELVSATSNFLPGVFLSTGLAKFNLTQLVYSF 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0532 423 PANTHER - 5 404 - -
Lal21g0532 423 Gene3D HUPs 13 151 IPR014729 -
Lal21g0532 423 Pfam Universal stress protein family 14 145 IPR006016 -
Lal21g0532 423 CDD USP_Like 15 149 - -
Lal21g0532 423 PANTHER OS08G0249100 PROTEIN 5 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0532 Lal-Chr21 3869347 3873154 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0532 - - aprc:113846853 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0532 21 3869347 3873154 Lal21g0532 21 3869347 3873154 ECH
Lal21g0532 21 3869347 3873154 Lal4g0434 4 3046014 3049578 LSH