Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0531 ATGTTCAAAAGAAGCTTGAATGAGCTGGGTTCTAATGTTCATGTCTCTGGTCTGATGAATGGTTGTATGGATTCAGATGGAGAGGGCCATGTGGAGTTTTCAAGCTTTGTTAACGTTGCTGAGGAATCTCGGAATGCATTGCCAGCATTGGTGAGTGAATGTAAAAATGCCGATATGTTGCTATTGGAGAATACCTCAGAAGATGATTGTCAGAATCAATCGCAGATGTGTTGTGAGAATGTTGAAGTTTCCGGTCTAAATAGTGGTTGGTTGTGCTCTGAAGGAAATTTTAAAGATGAAGGCAACTTGGACATTCCATCAGAGTCCGTAACTGTGAGTGGCTCACAGGAGCACTTTGTACAACAGGATGAGCATAAGGATGATAAGAGCAATATATTGCCCTTAGCAGGAGATGATTCAGCAGTTGAGGAAGGGAGAAACAATGGCGTTGGTTTACTTGACATTGCTTCCAATTCTGTGTCTGATTTCAGGCATCTTGAAATGACCTTGAAATCAGAACCTATTGCTCACTTGCTAGCTGATTGCAATCTGCAAAATAAGCAGGGGGGTGTTTTGAGAAATGTAGATCCCACGTCAAAGGTTGTGGAAACATTTGATGATTTTGGTGGGAGGGAAGCCGATGCATGCAAGCAGATTCCTCCCTCACAATTTATGAAAGTGTCATCACATCCATTCTATACAAAAGTAGAGAGCACGAGTGATCAGCAGCGTGATCAGAATGATGGCGAGGAGTGGAATAGTGATGAAAAGGCTAAAGCTTTTGCTGATATTGAAAACGACATTATTGATTCATATGCAAGGAATCAAGGACACTTGACCATAGTCTCCTTAGGAGGGAGTTCGCATGTACTTGATTCACCTTGTGAGCCTATCTTGTTGGATCAGGGCAACGAAATGAAGAATAATATATGTCAAATAGAATATAGTTTATGTGAATTGAAGAACCTTCCCTCAGAGGAAACTGCCAACTGTACCTTTAGAAAACCATTTTATCCTGAACCAGGTCAGCCCTCTGTTGTTTTAATCACCAGTAGCTCTTCAAAGGATGTGCCTGATCTGCTTCCGAATGGTGGTAATGTTTCCATCAGTAGTAACGCTGTCAACAATCCTGGACAGGCAGATATTGTTGAAGTTGATTGTATTGCTGAAAGAACACGATTGCCTTCTCAAAGGAATAGTCGAAGTACAAAACTTGGTCGTAAGACACAATCCAAAAATGCTTCTAGAAGATGCAAGAACAAAGCCACTGCGACACATCCAAGTGGTTTTACGGATATTATGTTAGAGGCTACTAGAAAGAAAAGAAGTTGCATCTCCAAACCAGCCCGTTCCTCTATGTGGGGATTGCTTGGGAACATTGAACAGTTTTTTGAGCAAGATAATGAGCTTGGGGTCGGTGAAGCCATGAACCAAGAATTGGGCAAGGCTAGAAGAAAACGTCAAAGTGGCAAAGTGATTAAAAATGGTGCAGGTTCTAGCTCATTGAATTCAGTGCAGAAGTGTTCTGCTTCAACTACTCGTGTTCGGTTGAGGGTCAAGATTGGGAAAGAAATTGATTTTAGTCGCTCACATGTTTTGATTCCAGAGGCTATTGATGCCTTGACTTCTGTTTCCCACTTGGGGCTTGGTTCGGGTTCACATAAAGTAGCCAACAATGCTGAAGGTACAATTTGTGAAGGGGTTGCTATAGGCAAGTCAGAATATTTAAAAATAGAGACGGACACTGATGCTACTGTTCTAAATGGGCAAACTACAAATAACCACTTAGAAAGTACTTCAAAAACTGAGAAGTCTGATGGGAATGCAGTGGAACCATATCTCTTGGTTGCTCCAAAGATAGAGGTTCAAGCATTGGTTGAGGCAACCAATAATAAGGGTATGGATCCTGGAACTTCGCCTGATTCAGAAGTTATCAATACAATTCCAGAAGACCAGATTGGAGAAGGGCTTGAAGAAGATTTACATCATGATATTTTACGTTATTCTAAAGAGTTCAAGTCCAATTTGGATGTTATCATCACGAAAAGAGGGAAAAAGGAAGACAAGCTTATTTGTTCAAGTGATTGTATATCTGAAGACAGATCACAAGGTCTACCAAGGAATAATAGAGCTAAGAATTCAAAGAACCACAGAGGTAAGAAGAATTTCAGTGATGCTGTTTGCTCTTTGGAATTGCCTATTTCCATTCAAATAAATGCTTCAAGTAAATCTGTAAGTTGTGAAGAATTGTCCACAGAACCATGGCCCCTTTCTGGAGAGATTGAACTTGGTGACTCTGCTGAGGCTTTGAAAAAAGTTAACATGCAAGTTATGACAACTCCTAACCAATCTGTTTACCATGAGTTGTCAGAATCCCAGGGTTCTGAGAATTTGCGATCTCATGCAAATCCTTTGGAGTGTAAACTTCCTAAAAGTCTTACCACCAGTAAAGTTAGCAAGAACAAATCTAAAGCTTATGGCTCAACGAGCAAGAAAAAGACTACTCATAGATGCAACGAGAAACAAAAAAAGTCAACTAATAACAGTGAAGTCAAGGGAAAAGATGTACTGCCCAAAGTTAAGCTTGAAGTGGAAGGTCAGTCACCCACAGAAGCAAATGTTGTTGGAAATCACAAGTTGGGTTCTGTTGGAGAAGTTAATGCTGGTGAAAACAGAGTATCAGACAATGTATCTAATTTGGAAATGGTACCTGGTGTTGGATTGGGAGAGCAGCAGCTATCACCACATAATGCATGGGTGCGTTGTGATGATTGTCACAAATGGCGACGTATTCCAGCTGTGCTTGCAGACTTAATTAATGAAACAAATGACACATGGACATGTAAGGACAATGGTGATAAAAACTTTGCCGATTGCGATATCCCTCAGGAAATGTCAAATGCAGAAATTAATGCTGAGTTGGGAATATCAGATGAAGAAGATGCGTATGAAGAGTCCAAAAGTTATAAGCAATTGGAATATCGACAGCCATCTGTTTCCCAGGGGTCAACTTTTTTCCGTATTTTAACCAATGAGTTTCTGCATCGTAGACATAAAACTCAGTCCATTGATGAGATAATGGTCTGCCATTGCAAGCCACCTCAAGAAGGCAAGTTGGGGTGTGGGGATGAATGTCTAAACCGGATGCTTAACATTGAATGTGTGAGTGGAACCTGCCCATGCGGGGATCGTTGTTCCAATCAACAGTTCCAAAATCGCAAGTATGCCAGCCTGAATTGGTTTAAATGTGGGAAAAAGGGTTATGGACTGAAGGCTCTAGAGGATATAGCTGAAGGCCAGTTTCTTATTGAATACGTTGGACAGGTACTTGATATGCATGCTTATGGGGCACGACAAAGAGAATATGCATTGAAGGGTCACAAGCATTTCTATTTTATGACCTTAAATGGTGGTGAGGTGATAGATGCAAGTGCAAAAGGAAACTTGGGGCGTTTCATTAATCATAGTTGTGATCCTAATTGTGGGACAGAAAAGTGGATGGTGAATGGGGAAATCTGTATTGGGCTGTTTGCATTGAAGGATATTAAGCAGGATGAAGAATTGACATTTGATTACAACTATGTAAGGGTTTTTGGTGCTGCCGCCAAAAAATGTTACTGTGGTTCTCCTCATTGTCGAGGTTATATAGGTGGTGGTGATCCACTTGATGACGAAGTGATAGTTCAAGGTGATTCAGATGAAGAATTTCCAGAACCTGTTATGCTTACCGAAGACGGTGAAATAAAAAACAGCGTGACTACACAATCTGCTAAGCCTATGTTAAAAGACAGGTATGTATTGAACAAGTCTGCAACTTCTATAGATGTATATGATACTCTGGAGAAAGAGAGTTGTATGAATCCTACCTCTTTGCACAGATCATCCGAAATTGAGGACTCAAAGGACAGGTTACCGTCTTCTGTTCTAGCACAAGACATTTCTCAACAAATGGAAGATGTAACAGACAAACCCATGCCTGATGTACATCCAGGATATGCAATGGAATCAGAGGTTGCAAATGATAAGTCCCACAGTCAACAATTAGAGTCTACTTCCCTTGCAACTGTCAGCAAAGTGATACCGAATTCTACTGGTAGTAATAGGGAATCACATCTGCATGCGAAGGCTCCTAAACCAAGTTGTTCTGTTAAAAAGGGTAAGATTTGTGCTAATCCTCCAACAGGCGTCAAAGCTGTGACAGCCAACCAATTCCAGGTGTCATCTGTCAAACTCAAAAAAGTAGTTGAAGGAACTTCCAATGGCCGGTTTGAAGCAGTTCAGGAGAAACTTAATGAGTTTCTGGATGGAGGTGGAGGAGTAAGCAAAAGGAAAGATGCCACCAAACTCTACCTGAAACTTTTGCTTCTCACTGTGGCATCGGGTGATAGGAGCAATGGTGAAGCAATTCAAAGCAATCGAGATCTTTCCATGATCCTTGACGCCCTTCTGAAAACAAAATCTAGAACAGTGCTAAATGATATAATTAACAAAAATGGTTTACAGATGTTACACAAAATAATGAAGCAGTACAGGCGGGACTTCAAAAAAATTCCTATACTAAGAAAGCTTCTCAAGGTCTTAGAGTACCTAGCAGAAGGCAAGATATTGACATTTGAACATATCAATAGCGGCCCCCCTTGTCATGGAATGGAGAGCTTTCGGGAGTCGATGCTGTCTTTAACGGAGCATAATGACAAACAGGTCCATCGAATTGCTCGAAGCTTCCGAGACAGATGGATTCCTAGGCCTGTCAGAAAAAATCATATGGACAGGGATGGTAATAGGGTGGAAGGTCGCAGAAGCTTCAACTCTAACAAATTTTCAGCACCGCACAACAGTAGGCAGGAGCCGGATTTAAGACCTACAGAAGCAATTGATCGTGTTCAGCAATCAGCGCCTGTGACAACTTCAGTAGACGCTGGTCCTCAGGAGGGCTGCTCTCCACTATCTCAAGACGGGGTTGAAAACAAAGGGGCAAAAAAGCGTGTGCGTAAAAGCAGATGGGATCAACCAGCAGAGACAAATTCATATCCTGTTGCGGTTATTGGCTCTATTTATGGAGGCCAGAAGATTATTCATGAAGATGTTCCACCGGGGTTTCCATGTCCAGCAGGTTCATTACCTGCTCCACTGAACTCGTGTGATCCTGCTTCACGAAATGCATGCCATACTGGACGTTCCTCCGATTCTGCCACAGTTCATCCGAAGGAAAAATTTAACCCTGGCCTGCCTGTCTTATATGGAATGCCGTTGTCTGTTGTCCAGCAATATGGAACACCTCATACTGAAATGACAGAGAGTTGGGTCACTGCACCTGGCATGAATTTCAACCCATTTCCTCCATTACCCTCGTACCCGTGTGATGTGAAAAAAATTCATCCTTCCGATACTACCTCTAATGCCATGTCAATTGATCAGCCAGCTGAAGTTAGACAATGTGATACCAGTGATCTAGTTTTTTCTTCCTCAGATGATATGGTTCCCAGCACAACTGATGCTAACCATGAAGACACAAACCTTTCACACGATGAAAACGAACACGTTTCTAAACGATTGAAGGGTGACTGCCATGATTTAGAGACGAATGACGTTAGACAGCAGAAATGGAATAGTACGAAAATACACCGACCTTGGTTCAGGAGAAATGCATGGAAATGTGATGTGAAGTTGAACAACTCCAATGCTGATATCTGCAGTATAGGTGTAGATGCACAGAAAGAATTAAAAGGTACATGCCACTCTAAGGATGCAACCTATAGAAATGAGAAAGGTGGCAATAATATTTAA 5787 0.4156 MFKRSLNELGSNVHVSGLMNGCMDSDGEGHVEFSSFVNVAEESRNALPALVSECKNADMLLLENTSEDDCQNQSQMCCENVEVSGLNSGWLCSEGNFKDEGNLDIPSESVTVSGSQEHFVQQDEHKDDKSNILPLAGDDSAVEEGRNNGVGLLDIASNSVSDFRHLEMTLKSEPIAHLLADCNLQNKQGGVLRNVDPTSKVVETFDDFGGREADACKQIPPSQFMKVSSHPFYTKVESTSDQQRDQNDGEEWNSDEKAKAFADIENDIIDSYARNQGHLTIVSLGGSSHVLDSPCEPILLDQGNEMKNNICQIEYSLCELKNLPSEETANCTFRKPFYPEPGQPSVVLITSSSSKDVPDLLPNGGNVSISSNAVNNPGQADIVEVDCIAERTRLPSQRNSRSTKLGRKTQSKNASRRCKNKATATHPSGFTDIMLEATRKKRSCISKPARSSMWGLLGNIEQFFEQDNELGVGEAMNQELGKARRKRQSGKVIKNGAGSSSLNSVQKCSASTTRVRLRVKIGKEIDFSRSHVLIPEAIDALTSVSHLGLGSGSHKVANNAEGTICEGVAIGKSEYLKIETDTDATVLNGQTTNNHLESTSKTEKSDGNAVEPYLLVAPKIEVQALVEATNNKGMDPGTSPDSEVINTIPEDQIGEGLEEDLHHDILRYSKEFKSNLDVIITKRGKKEDKLICSSDCISEDRSQGLPRNNRAKNSKNHRGKKNFSDAVCSLELPISIQINASSKSVSCEELSTEPWPLSGEIELGDSAEALKKVNMQVMTTPNQSVYHELSESQGSENLRSHANPLECKLPKSLTTSKVSKNKSKAYGSTSKKKTTHRCNEKQKKSTNNSEVKGKDVLPKVKLEVEGQSPTEANVVGNHKLGSVGEVNAGENRVSDNVSNLEMVPGVGLGEQQLSPHNAWVRCDDCHKWRRIPAVLADLINETNDTWTCKDNGDKNFADCDIPQEMSNAEINAELGISDEEDAYEESKSYKQLEYRQPSVSQGSTFFRILTNEFLHRRHKTQSIDEIMVCHCKPPQEGKLGCGDECLNRMLNIECVSGTCPCGDRCSNQQFQNRKYASLNWFKCGKKGYGLKALEDIAEGQFLIEYVGQVLDMHAYGARQREYALKGHKHFYFMTLNGGEVIDASAKGNLGRFINHSCDPNCGTEKWMVNGEICIGLFALKDIKQDEELTFDYNYVRVFGAAAKKCYCGSPHCRGYIGGGDPLDDEVIVQGDSDEEFPEPVMLTEDGEIKNSVTTQSAKPMLKDRYVLNKSATSIDVYDTLEKESCMNPTSLHRSSEIEDSKDRLPSSVLAQDISQQMEDVTDKPMPDVHPGYAMESEVANDKSHSQQLESTSLATVSKVIPNSTGSNRESHLHAKAPKPSCSVKKGKICANPPTGVKAVTANQFQVSSVKLKKVVEGTSNGRFEAVQEKLNEFLDGGGGVSKRKDATKLYLKLLLLTVASGDRSNGEAIQSNRDLSMILDALLKTKSRTVLNDIINKNGLQMLHKIMKQYRRDFKKIPILRKLLKVLEYLAEGKILTFEHINSGPPCHGMESFRESMLSLTEHNDKQVHRIARSFRDRWIPRPVRKNHMDRDGNRVEGRRSFNSNKFSAPHNSRQEPDLRPTEAIDRVQQSAPVTTSVDAGPQEGCSPLSQDGVENKGAKKRVRKSRWDQPAETNSYPVAVIGSIYGGQKIIHEDVPPGFPCPAGSLPAPLNSCDPASRNACHTGRSSDSATVHPKEKFNPGLPVLYGMPLSVVQQYGTPHTEMTESWVTAPGMNFNPFPPLPSYPCDVKKIHPSDTTSNAMSIDQPAEVRQCDTSDLVFSSSDDMVPSTTDANHEDTNLSHDENEHVSKRLKGDCHDLETNDVRQQKWNSTKIHRPWFRRNAWKCDVKLNNSNADICSIGVDAQKELKGTCHSKDATYRNEKGGNNI 1928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0531 1928 SMART PostSET_3 1201 1217 IPR003616 -
Lal21g0531 1928 MobiDBLite consensus disorder prediction 1628 1644 - -
Lal21g0531 1928 Gene3D - 916 972 - -
Lal21g0531 1928 MobiDBLite consensus disorder prediction 840 856 - -
Lal21g0531 1928 MobiDBLite consensus disorder prediction 1824 1847 - -
Lal21g0531 1928 ProSiteProfiles Zinc finger CW-type profile. 913 967 IPR011124 GO:0008270
Lal21g0531 1928 MobiDBLite consensus disorder prediction 1585 1671 - -
Lal21g0531 1928 ProSiteProfiles SET domain profile. 1076 1193 IPR001214 GO:0005515
Lal21g0531 1928 MobiDBLite consensus disorder prediction 393 409 - -
Lal21g0531 1928 Pfam SET domain 1087 1193 IPR001214 GO:0005515
Lal21g0531 1928 CDD SET_SETD2 1075 1217 IPR044437 GO:0010452|GO:0046975
Lal21g0531 1928 Pfam AWS domain 1039 1072 IPR006560 GO:0005634|GO:0018024
Lal21g0531 1928 SMART shorttest3 1024 1075 IPR006560 GO:0005634|GO:0018024
Lal21g0531 1928 Gene3D SET domain 973 1225 IPR046341 -
Lal21g0531 1928 SMART set_7 1076 1199 IPR001214 GO:0005515
Lal21g0531 1928 MobiDBLite consensus disorder prediction 1362 1381 - -
Lal21g0531 1928 MobiDBLite consensus disorder prediction 816 856 - -
Lal21g0531 1928 ProSiteProfiles Post-SET domain profile. 1201 1217 IPR003616 -
Lal21g0531 1928 ProSiteProfiles AWS domain profile. 1024 1074 IPR006560 GO:0005634|GO:0018024
Lal21g0531 1928 MobiDBLite consensus disorder prediction 1585 1599 - -
Lal21g0531 1928 MobiDBLite consensus disorder prediction 701 720 - -
Lal21g0531 1928 MobiDBLite consensus disorder prediction 393 426 - -
Lal21g0531 1928 SUPERFAMILY SET domain 1005 1214 IPR046341 -
Lal21g0531 1928 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-36 SPECIFIC 390 1852 - -
Lal21g0531 1928 Pfam CW-type Zinc Finger 919 964 IPR011124 GO:0008270
Lal21g0531 1928 PANTHER SET DOMAIN PROTEINS 390 1852 - -
Lal21g0531 1928 MobiDBLite consensus disorder prediction 235 255 - -
Lal21g0531 1928 MobiDBLite consensus disorder prediction 482 505 - -
Lal21g0531 1928 MobiDBLite consensus disorder prediction 241 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0531 Lal-Chr21 3852890 3866515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0531 1059 1216 C2H2 Transcription Factor Family AT2G23740 33.149 7.85e-20 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal21g0531 SET 6.3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0531 - - gmx:100795379 2284.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0531 21 3852890 3866515 Lal21g0531 21 3852890 3866515 ECH
Lal17g0500 17 3464394 3478440 Lal21g0531 21 3852890 3866515 LSH
Lal21g0531 21 3852890 3866515 Lal4g0432 4 3018454 3033107 LSH