LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal21g0528	ATGGATGAGTTTGGTGTGTTGACCGAAAGTTTTGGGTTGAAACCGCAAGGAAAATCAGCTCCAATGGCTTCATCTAAGCGATCCAATTCAAATCCGGGTCTAAACCCGAAATCTTCCTTAAATGGATCTAGATCTCATCAAAATTCGAATTTTGATTTCAATTTCAATTCTTTTCCCAGTAGTAATAAAAACCCCCATCATTTTGATGGCATTGATGATATCTTTGGTGGTGTTAGTGCTAAACCGAGTAACATCAATGTTGGTTCGTTTGATTTTGTGGATGATATATTTGGTGGAATGCCTAAGAAAAATGTGGGTGTTGATGATCTGTTAGATAAGATTGGTGGGTTCAATGTAAATGGTGCAAAAAGTTCGAATCAGAAAAAAATACCTGATTTTGATGAATTGATACCTGGATTTGGTGGAAGCACTTCTTCAAATTATGGTAAAGCCAGCACTGGCATAAATAAGCCTCATACACCAACTATCACATCTCAAGATGATCCATTTCTAATATTTGAAACCACTTCTAGCACAGCATCCACAGATTCATTCCTGGATTCACTTGAACAGACAAGTAAGTTAAATAGTTCCAAGGGTACAAAAGGCAGCTCTAGTAGTAGTACCATCCCGACATTGAGGCCTCCACCAAAGCCAACTAACGTTTCAAACACAAATAAAGTTAAAAACTCAAGTGTATCATCAATAGATGAGCTTGAGAACTTTGCTATGGGCCGGGTGCAGAATAATGGTAGTAGAAAGGCCAATATTAATACTAGTGAGATTAAACAAAACTCAGCAGCTAACACAAACAGTGGCAAAGGATCTCCAGCAGCTAACATAAACAGTGACAAAGGATCTCCAGCAGCAAGAGTGAATAAATCAAATGACATGGGTGATCTTGAATCTTTCTTCAGCATGGGTGTTCGATCAAGCAGTGTACCAAAGTCCAGGGCTGCACCTATGGATCATATGTTTGATCACCAAGTGAACAACAAAGTGAGATCTGAGGCATCACAAAGGGTGCCATCTGGATCATCAACCAATGTGAATAAATCATCAGTGTTGACATCTCTTGATGACCTGTCATTGATTTTTGGTGGTTCCCCATCATCTGAATTCAAGGAAGTTGAAGGGGAAAACGAAGAAAGACGAAAAGCAAGATTGGGACGTCATCAGAGAACACAAGAGCGAGCGTTAAAAGCAGTTGCTGATATGAACCAGCGTGACCTTCAAACGAAGATGGAGCAAGAAGAGAGACGTAGAATTGCTGATATTGCGGATGCTCAGATAAAGCGTTGGGCTGCAGGGAAAGAAGGCAACATGCGGGCATTGTTATCAACATTGCAAAATGTTCTTTGGCCAGAATGTGGTTGGCAGCCAGTGTCTCTTACAGATATGATTGCTTCAACTTCAGTTAAGAAAGTTTATAGAAAAGCAACTTTATGTATTCACCCAGATAAAGTCCAACAAAAAGGTGCTAATCTTGAACAGAAATATACTGCAGAGAAGGTTTTTGACATCCTTAAGGAAGCTTGGACCAAGTTCAATGCAGAAGAGCTTTCCTAG	1569	0.3983	MDEFGVLTESFGLKPQGKSAPMASSKRSNSNPGLNPKSSLNGSRSHQNSNFDFNFNSFPSSNKNPHHFDGIDDIFGGVSAKPSNINVGSFDFVDDIFGGMPKKNVGVDDLLDKIGGFNVNGAKSSNQKKIPDFDELIPGFGGSTSSNYGKASTGINKPHTPTITSQDDPFLIFETTSSTASTDSFLDSLEQTSKLNSSKGTKGSSSSSTIPTLRPPPKPTNVSNTNKVKNSSVSSIDELENFAMGRVQNNGSRKANINTSEIKQNSAANTNSGKGSPAANINSDKGSPAARVNKSNDMGDLESFFSMGVRSSSVPKSRAAPMDHMFDHQVNNKVRSEASQRVPSGSSTNVNKSSVLTSLDDLSLIFGGSPSSEFKEVEGENEERRKARLGRHQRTQERALKAVADMNQRDLQTKMEQEERRRIADIADAQIKRWAAGKEGNMRALLSTLQNVLWPECGWQPVSLTDMIASTSVKKVYRKATLCIHPDKVQQKGANLEQKYTAEKVFDILKEAWTKFNAEELS	522

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal21g0528	522	PANTHER	CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED	291	521	-	-
	Lal21g0528	522	PANTHER	CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED	1	50	-	-
	Lal21g0528	522	PANTHER	CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED	72	208	-	-
	Lal21g0528	522	MobiDBLite	consensus disorder prediction	193	211	-	-
	Lal21g0528	522	SUPERFAMILY	Chaperone J-domain	370	519	IPR036869	-
	Lal21g0528	522	MobiDBLite	consensus disorder prediction	193	233	-	-
	Lal21g0528	522	MobiDBLite	consensus disorder prediction	219	233	-	-
	Lal21g0528	522	MobiDBLite	consensus disorder prediction	1	56	-	-
	Lal21g0528	522	MobiDBLite	consensus disorder prediction	21	56	-	-
	Lal21g0528	522	MobiDBLite	consensus disorder prediction	375	395	-	-
	Lal21g0528	522	Gene3D	DnaJ domain	392	521	IPR036869	-
	Lal21g0528	522	PANTHER	AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED	72	208	-	-
	Lal21g0528	522	PANTHER	AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED	291	521	-	-
	Lal21g0528	522	PANTHER	AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED	1	50	-	-
	Lal21g0528	522	MobiDBLite	consensus disorder prediction	246	295	-	-
	Lal21g0528	522	MobiDBLite	consensus disorder prediction	246	290	-	-
	Lal21g0528	522	MobiDBLite	consensus disorder prediction	370	395	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal21g0528	Lal-Chr21	3824470	3829352	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal21g0528	-		-	gmx:100779375	601.282

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal21g0528	21	3824470	3829352	Lal4g0645	4	4831221	4838766	LSH
	Lal8g0573	8	3975393	3982294	Lal21g0528	21	3824470	3829352	PCT
	Lal21g0528	21	3824470	3829352	Lal8g0573	8	3975393	3982294	PCT