Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0514 ATGTCCATCACCATGAACATGGACATTCATGTCATCAATGACCTAGACTTCTCTGAAAACACCACCACAACCTCCTCCGACACTCACACTTCCGACGATGATCACGGTTGCAATTGGAACCACTGGTCCCCCATCGTCAACTGGGACGCTCTCACCGGTGACCAAAACTATTTCCACGGCCTCATCGACTCTCTCATGGATGACGTCGCCACTGCCGGCGTTCATCTTAGCCCTATCAACCACCAAGATGCCTGTAACTCCCCCTCCACTACCTCGGAAGACATAACCACCACCACGGACGACATAACCACCTCTGCATGTGAGGAGGAAGCAGCTGCAGGAACCACCGGCGACGTGGATTTCAACGGTTTAAGGTTGATCCACTTGATGATGGCCGCGGCTGAGGCCCTCACCGGTGAGAACAAGAGCCGCGAACTGGCTCGAGTGATATTGGTTCGGCTCAAAGAATTGGTTTCCCCAACCCACGGCACCAACATGGAACGTCTCGCAGCGTATTTTACCGAAGCCCTACAGGGTTTACTAGATGGCACAGGAGGTGCGCACAATAACAAGCATTATAATTACATCAGCAACGGTTCAAGTGGAACACACCGAGAAGATAACCACCACCGTCGCCAAACGGAGATGCTTGGAGCGTTTCAACTGCTTCAGGAAATGTCTCCTTACGTTAAATTCAGCCACTTCACTTCCAACCAAGCTATCGTTGAGGCTGTGGCAAACGAGAGAAGGGTCCATATCGTTGATTATGATATTATGGAAGGGATTCAATGGGCCTCACTCATAGAGGCATTTGCCTCAAACAAGAATGGCCTACCGGCGCCTTACCTCCGGATCACAGCGTTGTCACGAATTGGCACCGGAAGGAGATCCATCGCCACAGTGCAAGAGACCGGCCGCCGCCTAACTGCGTTTGCAGCCTCTCTTGGCCAGCCATTTTCCTTTCATCATTGCAGGTTGGACTCAGATGAAACCTTCCAATCTTCTTCTCTAAAGCTAGTCCGTGGAGAGGCTTTAGTATTCAACTGCATGCTACACTTGCCACACCTCCCTTACCGTGCACCCGATTCCATTGCATCATTCTTGAACGGTGCTAAGTCATTAAAACCAAAGCTAATAACATTAGCAGAAGAAGAGGTAGTTCCCATTATTGGTCACAACGCTGGTTTTGTTGGAAGATTCATGAACTCACTAAACCACTATTCCGCACTCTATGACTCATTGGAGGCTGGGTTTCCGATGCAGAACCGTGCAAGAGCATTAGTGGAACAGGTTTTCTTTGGGCCCAGAATCGCATCTTCAGTGGCTCAGTTATATTGGATGGGTGAGGAAGATGAAGAAAGAGGGTCATGGTTGAAGTGGTTAGGTGCTGTAGGGTTCAGGGGAGTTCCTATAAGTTCAGCCAATCAATGCCAAGCAAGGTTGTTGTTGGGACTTTTTAATGATGGATATGGGGTTAAGGAGTTTGAGAGTAATAAGTTAGTGTTGGATTGGAAATCAAGGCGTTTGATTTCTGTTTCTGTTTGGACTAGTTCTTCAGAATCTGATACGTAG 1572 0.4873 MSITMNMDIHVINDLDFSENTTTTSSDTHTSDDDHGCNWNHWSPIVNWDALTGDQNYFHGLIDSLMDDVATAGVHLSPINHQDACNSPSTTSEDITTTTDDITTSACEEEAAAGTTGDVDFNGLRLIHLMMAAAEALTGENKSRELARVILVRLKELVSPTHGTNMERLAAYFTEALQGLLDGTGGAHNNKHYNYISNGSSGTHREDNHHRRQTEMLGAFQLLQEMSPYVKFSHFTSNQAIVEAVANERRVHIVDYDIMEGIQWASLIEAFASNKNGLPAPYLRITALSRIGTGRRSIATVQETGRRLTAFAASLGQPFSFHHCRLDSDETFQSSSLKLVRGEALVFNCMLHLPHLPYRAPDSIASFLNGAKSLKPKLITLAEEEVVPIIGHNAGFVGRFMNSLNHYSALYDSLEAGFPMQNRARALVEQVFFGPRIASSVAQLYWMGEEDEERGSWLKWLGAVGFRGVPISSANQCQARLLLGLFNDGYGVKEFESNKLVLDWKSRRLISVSVWTSSSESDT 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0514 523 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 516 IPR005202 -
Lal21g0514 523 PANTHER SCARECROW-LIKE PROTEIN 26 7 516 IPR030028 -
Lal21g0514 523 ProSiteProfiles GRAS family profile. 117 516 IPR005202 -
Lal21g0514 523 Pfam GRAS domain family 126 516 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0514 Lal-Chr21 3710552 3713108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0514 83 519 GRAS Transcription Factor Family AT3G54220 33.409 3.92e-53 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal21g0514 GRAS 7.3e-98 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0514 - - gmx:100787926 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0514 21 3710552 3713108 Lal21g0514 21 3710552 3713108 ECH