Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0513 ATGAAAGTTATCATAAGTTTCTCTTTCTTTTGCCTTTTGTTTCATGCTGTCCCTGCTTACACTTTTTTGGATTATATCAAACCAAATTTCACTGCTTCACATTTTCGATTCATCGATAATAATTCCGGTAACTTCTTGTTGTCTCAGAACAGAACATTTGAGGCTGCAATATTCAATCCAGGTGGTCAACAAACAAGTTTCTATTTGTGTGTCATTCATGTTGCATCAAGCTCCATTGTTTGGTCTGCTAACCGCGACAATCCTATCTCGGAATATGGTATTATGAATTTGACTATCAATGGGATTGTAATTGTTGATGAAGATGGAGATGTTAAATGGTCAACTCCACCACTGAAATCACTGGTAGATAAGCTTGTACTTACTGATATGGGGAATCTTGTGTTGCTTGATCAATCAAATGTTTCTCTTTGGGAGAGTTTCCAGCATCCGACCGATACAATTGTTATTGGACAACGTTTGCCTATTGGGACATGGCTGTCAAGTGCTGCATCCGATTCAGATTTGTCAGATGGAAATTACAATCTGACAATTACTGCCTCGGATGCAATACTGCAATGGTATGGACAACCATACTGGAAATTGTCAATGGATACAAAAGCCTATAAGAATTCAAATGATATGGTGGAATACATGGAGATAAACAGAACAGGTTTTTATCTCTTTGGTCATGATGGAGTAGTGCCTGTCTTTCAGGTAGGCTTGCCGCTGACCGATTTTCGAATCGCTAAATTGGCTATCTCAGGCCAGTTTGTTATCAGCAGCTTTTCTGGTACTGACTGGGACCGGGAATTCGTGGGGCCGGGGGACAGTTGTCAAAGTCCTTTAGCTTGTGGCAGAGTTGGATTATGTAGTGATGAGTCCTCTACTCCTGTTTGTTCTTGTCCACCAAACTTCAATGTAGGCTCAGGTAATTATAGTGGTTGTGTACCTAGCAGTGGATCTTATTCTTTGCCAATTGCTTGTAGTTCTAATGATAGTCAATCCAATTCTTCAGTGGTTTCATTTTTGAAACTCGGGTATGGTGTCGATTACTTTCACAATATTTACTCTGATCCAGTTATGTTAGGAGTGAATGTATCTGTCTGTAAAGATCTTTGTTCCAGAAATTGTTCCTGCTTGGGAGTTTTCTATAAAAACTCATCTGATTCTTGCTATAATGTTGAAAATGAGTTAGGATCCATTATGTCAAGTGATGAAGATGAAGACGACATGTTGGCCTTCATTAAAGTTATTGTTGCATCTACAACAACCGATGATGATGATGATGATCAAACTTCTCAAAAAAATGGGTTTCCTGTGGCGGCCGCAGTGCTGTTACCTATAACTGGAATCATTATTATTGTATCTCTAGTTTTCCTTTGGTGTAGAAGAATGAAATTGTCCAAGACACAAGATGTACAATTAGGGAAATCCATCTCAAATTCATCCTCCAATGATATGGATGCCTTCTACATTCCAGGCTTACCTAGAAGGTTTGACTATGAAGAACTCGAGGAGGCTACTGATAATTTCAAGACTCTAATCGGGTCAGGCGGATTTGGTTCTGTCTACAGAGGCGTACTGTCCGATAATACTGTTGTAGCAGTAAAGAAAATAATCAATTTAGGCATTCAAGGGAAAAAAGATTTCTGCACTGAGATTGGTGTTATTGGAAATACTTACCATGCTAATTTGGTCAAGCTGAAAGGATTTTGTGCTCAGGGGAGACATCGTCTATTGGTTTACGAGTACATGAATCGTGGATCCCTTGACCGCACCCTCTTTGGGACTGGACCAGTCCTAGAATGGCAAGAGAGGTCTGAAGTAGCGCTCGGAACAGCACGTGGACTTGCTTACTTGCATAGCGGTTGTGAGCAAAAGATAATTCATTGTGATATCAAACCAGAGAACATTCTTTTGCAAGATCAGTTTCAGGCTAAGATATCTGATTTTGGACTCTCGAAATTTCTTAGCCCTGAAATGTCTGGTTTATTCACAACAATGAGAGGCACTCGCGGTTACCTTGCTCCAGAGTGGCTTACTAACTCTGCAATTTCAGAAAAGACTGATGTCTATAGTTTCGGAATGGTATTGCTTGAACTGGTCAGTGGAAGGAAAAATTGTTATTTCAGGTCAAACAGCCATAGCGTAGATGATGGCAACAGCGGTGGTGGCCTTTCATCGAATTCATCAACAACAGGAATGGTTTATTTTCCCTTATTTGCATTAGAGATGCATGAACAAGGGAATTACCGGGAGCTAGCTGATCAAAGACTAGAAGGTCGAGTTACAAATGATGAGGTAGAGAAATTAGTGCGGATTGCCTTGTGTTGTGTTCATGAAGAACCAGCACTTAGGCCAAACATGGTTACTGTTGTTGGCATGCTGGAAGGTGAAATTCCATCGCCGCAACCAAGGATAGAATCTTTGAACTTCCTGCGATTTTATGGTCATAGGTTTACAGAGGCTTCCATGATAGCAGAGGAAAGTGAGTATAGCTGTATCTTGCATCAACAAGCGCGTAATTCTACAAGCCAAAATGGTTTTTCTTACATATCTTCGGAAATTGTCTCAGGGCCAAGATAG 2586 0.4037 MKVIISFSFFCLLFHAVPAYTFLDYIKPNFTASHFRFIDNNSGNFLLSQNRTFEAAIFNPGGQQTSFYLCVIHVASSSIVWSANRDNPISEYGIMNLTINGIVIVDEDGDVKWSTPPLKSLVDKLVLTDMGNLVLLDQSNVSLWESFQHPTDTIVIGQRLPIGTWLSSAASDSDLSDGNYNLTITASDAILQWYGQPYWKLSMDTKAYKNSNDMVEYMEINRTGFYLFGHDGVVPVFQVGLPLTDFRIAKLAISGQFVISSFSGTDWDREFVGPGDSCQSPLACGRVGLCSDESSTPVCSCPPNFNVGSGNYSGCVPSSGSYSLPIACSSNDSQSNSSVVSFLKLGYGVDYFHNIYSDPVMLGVNVSVCKDLCSRNCSCLGVFYKNSSDSCYNVENELGSIMSSDEDEDDMLAFIKVIVASTTTDDDDDDQTSQKNGFPVAAAVLLPITGIIIIVSLVFLWCRRMKLSKTQDVQLGKSISNSSSNDMDAFYIPGLPRRFDYEELEEATDNFKTLIGSGGFGSVYRGVLSDNTVVAVKKIINLGIQGKKDFCTEIGVIGNTYHANLVKLKGFCAQGRHRLLVYEYMNRGSLDRTLFGTGPVLEWQERSEVALGTARGLAYLHSGCEQKIIHCDIKPENILLQDQFQAKISDFGLSKFLSPEMSGLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRKNCYFRSNSHSVDDGNSGGGLSSNSSTTGMVYFPLFALEMHEQGNYRELADQRLEGRVTNDEVEKLVRIALCCVHEEPALRPNMVTVVGMLEGEIPSPQPRIESLNFLRFYGHRFTEASMIAEESEYSCILHQQARNSTSQNGFSYISSEIVSGPR 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0513 861 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Lal21g0513 861 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 8 847 - -
Lal21g0513 861 Gene3D Phosphorylase Kinase; domain 1 482 584 - -
Lal21g0513 861 ProSiteProfiles Protein kinase domain profile. 509 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0513 861 PIRSF SRK 1 850 IPR024171 GO:0004674
Lal21g0513 861 SMART serkin_6 509 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0513 861 Pfam S-locus glycoprotein domain 251 306 IPR000858 GO:0048544
Lal21g0513 861 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 201 IPR036426 -
Lal21g0513 861 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 8 847 - -
Lal21g0513 861 Gene3D Transferase(Phosphotransferase) domain 1 585 804 - -
Lal21g0513 861 CDD B_lectin 41 150 IPR001480 -
Lal21g0513 861 CDD STKc_IRAK 515 798 - -
Lal21g0513 861 ProSitePatterns Protein kinases ATP-binding region signature. 515 538 IPR017441 GO:0005524
Lal21g0513 861 ProSiteProfiles Bulb-type lectin domain profile. 31 148 IPR001480 -
Lal21g0513 861 Pfam D-mannose binding lectin 79 160 IPR001480 -
Lal21g0513 861 Pfam Protein kinase domain 512 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0513 861 SUPERFAMILY Protein kinase-like (PK-like) 484 796 IPR011009 -
Lal21g0513 861 Gene3D - 41 161 - -
Lal21g0513 861 SMART blect_4 37 150 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0513 Lal-Chr21 3694755 3697340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0513 492 805 Receptor kinase-like Gene Family AT5G20050 43.119 4.91e-75 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lal21g0513 Pkinase 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0513 - - ahf:112766506 1152.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0513 21 3694755 3697340 Lal21g0513 21 3694755 3697340 ECH