Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0508 ATGTTTCAATCTCAGCACCAACACCATGTGGCTGATTCCATGTGGTTCAAGAATTATGTCAATGATGTAATGCGCTTAGGAAGAAAACGTGATGACTACTTCTCTGAGCTAGGAAAATTTAATAACAAATATGGCAATTTTACTAAGCAAAATGAGTCGACTGTGGCGGCGCCACCATCACCACCACCACCACCACCACCTCCTCCACCTCCTCCTCCGGTTCAAAGGCAGAAACGGGTATTATGGTCGGAAGGAGAGCACAAGCTATTTGTTTATGGACTGGGAAAATATGGAAGAGGAAAATGGAAGAGCATATCAATAAATGTGCTTCCATCAAAGACACCATCACAAATAGCAAGCCATGCACAGAAATATTTCCTACGTAAAGCAACTACAGAAAAGAAAAGAAAGAGTATTCATGATCATGACAACAACAACATGATGATGATGGAAGCTAATCACTATCATGCTGCTTTGGTACCAATAGAACCACAAGAACTAATGCAGCATGCATCAATAAATGCACAACCAATGAATAATTTGCCTCAACAAATAGCAAGTCATGGACAAATATATTTCCTTCATCAAGCAGCAACAGAAAAGAGTATTCACGACAACAACAACAACAACAACATAATGATGGAACCTAATCACAATGATGCTGCTTTGGTTCCAATAGTGCCACAAGAAATGCCACATGCAGCAGCAACAAATGCAGAACCAGTGAATACTTTGGTTCAACAAATAGATGATTTTGATTTGAATAATATTGATTGGAATGCTGAACCAGAATTGCAACAAATTGGGGAAGAAGATGAAACAGAATTCATGAATTTCTTGGAAGCACTTCCTGATTCAGGCCCAATACTTCCCTTCAGATTCTCCTACTCAACATTCCATCAATCACAACAACAACAACAATGA 924 0.3918 MFQSQHQHHVADSMWFKNYVNDVMRLGRKRDDYFSELGKFNNKYGNFTKQNESTVAAPPSPPPPPPPPPPPPPVQRQKRVLWSEGEHKLFVYGLGKYGRGKWKSISINVLPSKTPSQIASHAQKYFLRKATTEKKRKSIHDHDNNNMMMMEANHYHAALVPIEPQELMQHASINAQPMNNLPQQIASHGQIYFLHQAATEKSIHDNNNNNNIMMEPNHNDAALVPIVPQEMPHAAATNAEPVNTLVQQIDDFDLNNIDWNAEPELQQIGEEDETEFMNFLEALPDSGPILPFRFSYSTFHQSQQQQQ 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0508 307 PANTHER TRANSCRIPTION FACTOR KUA1 19 176 - -
Lal21g0508 307 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 78 129 IPR006447 GO:0003677
Lal21g0508 307 MobiDBLite consensus disorder prediction 51 76 - -
Lal21g0508 307 Pfam Myb-like DNA-binding domain 81 126 IPR001005 -
Lal21g0508 307 CDD SANT 82 126 IPR001005 -
Lal21g0508 307 Gene3D - 81 131 - -
Lal21g0508 307 ProSiteProfiles Myb-like domain profile. 74 126 IPR001005 -
Lal21g0508 307 PANTHER TRANSCRIPTION FACTOR SRM1 19 176 - -
Lal21g0508 307 SMART sant 78 128 IPR001005 -
Lal21g0508 307 ProSiteProfiles SANT domain profile. 82 130 IPR017884 -
Lal21g0508 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 130 IPR017930 -
Lal21g0508 307 MobiDBLite consensus disorder prediction 56 76 - -
Lal21g0508 307 SUPERFAMILY Homeodomain-like 75 129 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0508 Lal-Chr21 3642361 3643284 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal21g0508 Myb_DNA-binding 1.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0508 - - lang:109352793 94.3597