Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0507 ATGGATCATGGTAACCCTAATTCTTCTTCTTCTTCTTCCTCTCCGCGCAATCTCATTCGCCATTTTCAAGCTGCTTTGAAGCGTCATCGTCCTCTCGGTATGATGCAGCAGCCTAATTCTTTGAAGCCAAAGCGTGTTCTTCTTCTTCCGAAACGAAATGTGTCGAAGGATGTGAATAAGTCTCATGATATGTTATTGAAGGACTCGATTCCGAATGTTCCGTCGGATTCTGATGGAACGCCTCCATCTGTTTTGACATTTGATGAAGGTTCAAATACTTTTGCTGCACAACAACAGCATCACCAGAAACGTGTGTTGGACTCAAAACAAAACAACTTTATCATGCCTTCTTTGCAGGTACAATCTCAAAATGTTGATGCTCACAAGAAAGTGCAATTCTCTGTTCAAAATAATAGTGCTGCCAAGGGGGCCATTGATGGAAAGGCCACTGAGTTGGACAACTTATCATCTCTTATGAGTTCACTTGGATTCACAGAAATGGACTGGGTTGAAATCGGTCAACTTGAACCATCAATTGAAGAATCAAAGCTCCAAAGAGTCCATGAGGGAGAGCATGACACAAGTTTGAGATCTGAGGGAGGAGTAAGTTCTATGTTGCCAAAGAGAACAACAGTTTCCCAGGATCTTATGCAGGATTTCACGAACTTTTTAGGTCAGCCGATGACGCAAAGTTCGGCGATGGGGACTTCCTGTGCTACAACTACCTCACTCAATTCATCTTCAGCTCCCATGCTAAATTCAACATCCCATTATTCTCAATTGCATTTTGATAACGGCTCTCGTGTGGCTGCGGAACCTTTGGAGGAGTTTAATATTAATCCTCACCGCAAAACTGAAGAGGTTATGAAATCATCACGTGGTTCCCTAAAAGATCCCAATAGAATGTCTGTTGATCAGACCCCAATTGCAGTACAAGCTTCTGGCTCTTCTGTTGATGCAGAGTTGTCATTTAAGGAGAGGGACCCATCTAAGGATCAACAAGGGTGCAATTCAAAAGAAACCAGCATTTCAAAATATACTTCTTGTCTTGATGACAAGTCAACTAAAAGGGAAGAACCAGCAGATGTTAACATCCATCCTCAGGCTCCAATGACCAAAACCTCATCTTCAGATGTGAAGTTGGAGTCTTCTAAGTTAGAAAAGCGAGAGAAGGCTGCAAGTAGTAAAGGTTCATCAACCTCTCGGAGAAAGGCCTACGACCCTAATTTATTTTTTGAAGTCAATGGCAAGCTTTATCAAAGGCTTGGCAAGATAGGTAGTGGTGGAAGCAGTGAGGTCCACAAAGTGATTTCATCAGACTGTAAGATCTATGCACTTAAAAAGATCAAGCTCAAGGGTCGCGATTATGCTACTGCATTTGGGTTTTGTCAAGAGATTGATTATCTAAATAGACTCAAAGGAAAGGATAATATCATACAGCTTATAGATCATGAGGTGCTTTTCTCAATTTCTGTTATGTACAAAGTGGTTACTGACAAGGCTTTACTTAAGGAAGTAATGAAAGGCTCCATCAGTAATAAGGATGGCCGAGTCAAGGATGATGGATATATATACATGGTACTTGAATATGGGGAAATCGATCTGGCTCACATGTTGTCCCAGAAGTGGAAGGAACTAGATGGATACAACCAGACCATAGATGAGAACTGGCTTCGATTTTATTGGCAGCAAATTCTTCAAGCTGTCAACACTATTCATGAGGAACGTATTGTGCACTCTGACTTGAAGCCAGCTAATTTCCTTCTTGTCAAAGGTTCCCTAAAATTGATTGATTTTGGTATAGCCAAGGCAATAATGAATGATACAACTAACATCCAACGGGATTCACAGGTGGGTACTCTCAGTTACATGTCTCCAGAAGCATTTCTGTGTAATGAGAGTGATGTGAACGGAAACATCATAAAATGTGGTAGGCCATCAGATATCTGGTCCCTGGGTTGCATCCTTTATCAAATGGTATATGGGAGAACCCCGTTTTCAGAGTACAAGACATTTTGGGCAAAGTTCAAAGTTATAACAGATCCAAACCATGAGATTATATATGAACCAGTTTCGAATCCATGGCTTATGGATCTTATGAAGAGGTGTCTAGCATGGGATCGAAATCAAAGGTGGAGAATTCCTGAGCTACTCCAACACCCTTTTATTGTTCCTCCCGTGCCATCTCATCAACCATCTTTGGGCCAAGATCAGAGCTGTAAATTGCTGCAACTTATTGCCAAAACTTGTACAAATGACCCTGAAACATCCCAACTGTGTTGTCAGCTCCAACAGGTTCTTTATGATCCCCTCAATTTGATAACTCCTCACGCAGTAAATGCTCGAGATCAACAACTAAAACTGCTGTCCCAGATATCAGAACTCAGTATTCAGCTGCAGGAGCGTTTGAAAAGTACTGAACTACTGATAACAAGTAGGGATGAAGGGAGATAG 2454 0.4152 MDHGNPNSSSSSSSPRNLIRHFQAALKRHRPLGMMQQPNSLKPKRVLLLPKRNVSKDVNKSHDMLLKDSIPNVPSDSDGTPPSVLTFDEGSNTFAAQQQHHQKRVLDSKQNNFIMPSLQVQSQNVDAHKKVQFSVQNNSAAKGAIDGKATELDNLSSLMSSLGFTEMDWVEIGQLEPSIEESKLQRVHEGEHDTSLRSEGGVSSMLPKRTTVSQDLMQDFTNFLGQPMTQSSAMGTSCATTTSLNSSSAPMLNSTSHYSQLHFDNGSRVAAEPLEEFNINPHRKTEEVMKSSRGSLKDPNRMSVDQTPIAVQASGSSVDAELSFKERDPSKDQQGCNSKETSISKYTSCLDDKSTKREEPADVNIHPQAPMTKTSSSDVKLESSKLEKREKAASSKGSSTSRRKAYDPNLFFEVNGKLYQRLGKIGSGGSSEVHKVISSDCKIYALKKIKLKGRDYATAFGFCQEIDYLNRLKGKDNIIQLIDHEVLFSISVMYKVVTDKALLKEVMKGSISNKDGRVKDDGYIYMVLEYGEIDLAHMLSQKWKELDGYNQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMNDTTNIQRDSQVGTLSYMSPEAFLCNESDVNGNIIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDPNHEIIYEPVSNPWLMDLMKRCLAWDRNQRWRIPELLQHPFIVPPVPSHQPSLGQDQSCKLLQLIAKTCTNDPETSQLCCQLQQVLYDPLNLITPHAVNARDQQLKLLSQISELSIQLQERLKSTELLITSRDEGR 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0507 817 MobiDBLite consensus disorder prediction 296 319 - -
Lal21g0507 817 SUPERFAMILY Protein kinase-like (PK-like) 410 738 IPR011009 -
Lal21g0507 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 577 589 IPR008271 GO:0004672|GO:0006468
Lal21g0507 817 CDD PKc_Mps1 417 722 - -
Lal21g0507 817 Gene3D Transferase(Phosphotransferase) domain 1 545 726 - -
Lal21g0507 817 ProSitePatterns Protein kinases ATP-binding region signature. 425 447 IPR017441 GO:0005524
Lal21g0507 817 SMART serkin_6 419 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0507 817 MobiDBLite consensus disorder prediction 335 349 - -
Lal21g0507 817 PANTHER DUAL SPECIFICITY PROTEIN KINASE TTK 7 771 IPR027084 GO:0004712|GO:0007093|GO:0051304
Lal21g0507 817 MobiDBLite consensus disorder prediction 280 294 - -
Lal21g0507 817 PANTHER MIXED LINEAGE PROTEIN KINASE 7 771 - -
Lal21g0507 817 Pfam Protein kinase domain 419 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0507 817 MobiDBLite consensus disorder prediction 183 203 - -
Lal21g0507 817 ProSiteProfiles Protein kinase domain profile. 419 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0507 817 MobiDBLite consensus disorder prediction 380 397 - -
Lal21g0507 817 MobiDBLite consensus disorder prediction 280 403 - -
Lal21g0507 817 Gene3D Phosphorylase Kinase; domain 1 412 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0507 Lal-Chr21 3633109 3640152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0507 425 724 MAP Kinase Kinase Kinase AT4G08470 28.013 1.00e-23 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Lal21g0507 Pkinase 1.9e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0507 K08866 - gmx:100788990 967.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0507 21 3633109 3640152 Lal21g0507 21 3633109 3640152 ECH
Lal17g0454 17 3114691 3120727 Lal21g0507 21 3633109 3640152 LSH