Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0500 ATGGACATATATGAGCCATTTCAGCAAGTTAACATGTGGGGTGATAGCTTTAAAGTTGAAGGAGGAATGAATTCAATTGCTTCCCCAGTGTTACTAGTGAACACTACCATGGAAGCTAAGTCTGAATATATTCCTCATGGACCAAGAGAACCTTGTGGAAATGATCAAGAGAGTACTAGTACTAATAACAAAGATGTTAGTAAGGTGCTAAGACGCCTAGCTCAGAATCGAGAGGCTGCTAAGAAAAGTCGGTTGCGAAAAAAGGCTTATGTTCAACAATTAGAAACAAGCCGGTTGAAGCTTATGCAATTGGAATTGGAGATTGGGAAAGCAAGAAAACAGAGTATGTACATTGGTGGTACTACATTTGATGCTAGTTATATGGGATCTCATGGAACATTACTTTTGCACTCAGGGATCGTCGCGTTTGAAATTGAATACGGACATTGGGTTACAGAGCAACATAGGTGGAATGAAGAACTTAGGAATGCATTTCAAACTAACGCGTGCGACGTTCAGCTCCATATACTTGTTAAGAGTGTCTTGAACCATTACTCAAACCTTTTCAGAATGAAAGCAGATGCTGCAAAGCTTGATGTCTTCTATTTAATTTCTGGTGTGTGGAAAGCATCGGTCGAGCGCATTTTCCTTTGGATTGGAGGATCTCGCCCGTCACAGCTTCTGAATATCATTGTGCCACAACTTGAGCCTTTGAATGATGAACAAATGACTAGTATTCACAATCTCCACCTATCATCTCAGCAAGCTGAAGATGCACTTTCACAAGGATTGGATAAACTTCAGCAAAGTATGGTCCACAACATAGTAGTTGATCAGTTAGGTGTAGGAAATTTCGAGTTTCAGATGGCCATTGCCATGGAGAAAATTGAAGCACTAGAAGGTTTTGTAAACCAGGCAGATCATCTTAGGCAACAAACTTTGCTTCATATGTCAAGGATCCTAACAACACACCAAGCTGCACAAGGATTATTGGCTCTAGGGGAATACTTACACCGTCTTCGTGCTCTTAGTTCTCTTTGGGCTAACCGTTCATGTGATTCTACCTAG 1068 0.4092 MDIYEPFQQVNMWGDSFKVEGGMNSIASPVLLVNTTMEAKSEYIPHGPREPCGNDQESTSTNNKDVSKVLRRLAQNREAAKKSRLRKKAYVQQLETSRLKLMQLELEIGKARKQSMYIGGTTFDASYMGSHGTLLLHSGIVAFEIEYGHWVTEQHRWNEELRNAFQTNACDVQLHILVKSVLNHYSNLFRMKADAAKLDVFYLISGVWKASVERIFLWIGGSRPSQLLNIIVPQLEPLNDEQMTSIHNLHLSSQQAEDALSQGLDKLQQSMVHNIVVDQLGVGNFEFQMAIAMEKIEALEGFVNQADHLRQQTLLHMSRILTTHQAAQGLLALGEYLHRLRALSSLWANRSCDST 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0500 355 PANTHER TRANSCRIPTION FACTOR TGA9 1 351 - -
Lal21g0500 355 SMART brlzneu 64 124 IPR004827 GO:0003700|GO:0006355
Lal21g0500 355 Pfam bZIP transcription factor 68 97 IPR004827 GO:0003700|GO:0006355
Lal21g0500 355 Gene3D - 67 117 - -
Lal21g0500 355 ProSiteProfiles DOG1 domain profile. 140 350 IPR025422 GO:0006351|GO:0043565
Lal21g0500 355 MobiDBLite consensus disorder prediction 43 64 - -
Lal21g0500 355 SUPERFAMILY Leucine zipper domain 68 101 IPR046347 GO:0003700|GO:0006355
Lal21g0500 355 Coils Coil 87 114 - -
Lal21g0500 355 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 71 86 IPR004827 GO:0003700|GO:0006355
Lal21g0500 355 PANTHER FACTOR TGA7, PUTATIVE-RELATED 1 351 - -
Lal21g0500 355 Pfam Seed dormancy control 159 232 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0500 Lal-Chr21 3559278 3567193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0500 1 355 Calmodulin-binding Proteins AT5G10030 52.941 1.40e-128 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal21g0500 DOG1 4.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0500 K14431 - gmx:100794268 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0500 21 3559278 3567193 Lal21g0500 21 3559278 3567193 ECH
Lal17g0438 17 2992140 2995869 Lal21g0500 21 3559278 3567193 LSH
Lal6g0500 6 3208246 3212274 Lal21g0500 21 3559278 3567193 PCT
Lal21g0500 21 3559278 3567193 Lal6g0500 6 3208246 3212274 PCT