Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0459 ATGGCACCTAGTTTTGACTGTGTTTCAAGCCTTCTCTGTTCAGAAGACAGAGATAGTGTTTTCGAAGAAAACTCTTCTGTGTACGAGGATACGTGGCAGCATATTAGGAACCATCAAAAGCATCACTTTGGTGAATCACATGTGTTGCCATTGCAGGATGATGAGTGTTTTGCTTCATTGGTTGAAAAGGAATGCCACCACTGCCCTGGTGTAGTTTACTTGAATAGGATGTATAATGGGGATTTGGATTTTGGTGCAAGAAAAGAGGCTGTTGATTGGATTGAAATGGTCCGATCACAGTTTGGTTTTGGACCTCTTTGTGCATATCTATCAATAAATTACTTGGATCGCTTCCTTTCTGCGTATCAATTACCGTTTTTGTGCTTGCATAAGGGAAGAGATTGGGCAATGCAATTGTTGGCTGTGGCATGTTTGTCTCTGGCTGCTAAAATCGAAGAATGTGATGTTCCAATGATTGTTGATTTGCAGGTAGGTGAATCCAAGTTTGTGTTTGAAGCTAAAGCCATACAAAGAATGGAGCTTCTTGTGCTGAGCACATTGAATTGGAGAATGCAACCAATTACTCCTTTTTCATTCATTGATCGTTTCCTTTACAAGATCAATGACGACGATCAAAGTCAATTAAGATCTTCAATTTTGCAATCTACCCAACTTATACTAAGCACTGCAAGAGGGATCGACTTCTTGGCATTCAAACCATCAGAGATTGCAGCAGCTGTGGCTATATCTGTTGTAGGCGAAACCAAAACTATTGACGCTACGAAAGCAATTTCTGTTCTGATTCCGCAGGCTGAAGAGGAGAGAGTGTTGAAGTGTGTTAAAATGGTTGAGGAGCTGTTACTGAACAATGGGATCTACAAGGATTATTCAAGTGTTATTGTACCATGTATGACCCAAAGTCCAATTGGGGTGTTGGATACTTCAAGCTTCAGCTACAAAAGTGATTTCACAAATGCTGATTCATGTGCAAATTCATCACATAATAGCCCTGATACTAAAAGGAGGAAGCTAAACAACACATATGGATCATAG 1053 0.4017 MAPSFDCVSSLLCSEDRDSVFEENSSVYEDTWQHIRNHQKHHFGESHVLPLQDDECFASLVEKECHHCPGVVYLNRMYNGDLDFGARKEAVDWIEMVRSQFGFGPLCAYLSINYLDRFLSAYQLPFLCLHKGRDWAMQLLAVACLSLAAKIEECDVPMIVDLQVGESKFVFEAKAIQRMELLVLSTLNWRMQPITPFSFIDRFLYKINDDDQSQLRSSILQSTQLILSTARGIDFLAFKPSEIAAAVAISVVGETKTIDATKAISVLIPQAEEERVLKCVKMVEELLLNNGIYKDYSSVIVPCMTQSPIGVLDTSSFSYKSDFTNADSCANSSHNSPDTKRRKLNNTYGS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0459 350 SMART cyclin_7 92 185 IPR013763 -
Lal21g0459 350 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 345 - -
Lal21g0459 350 PANTHER CYCLINS 1 345 IPR039361 -
Lal21g0459 350 Gene3D - 58 281 - -
Lal21g0459 350 Pfam Cyclin, N-terminal domain 56 191 IPR006671 -
Lal21g0459 350 MobiDBLite consensus disorder prediction 328 350 - -
Lal21g0459 350 SUPERFAMILY Cyclin-like 177 303 IPR036915 -
Lal21g0459 350 Gene3D - 70 192 - -
Lal21g0459 350 SUPERFAMILY Cyclin-like 49 191 IPR036915 -
Lal21g0459 350 Pfam Cyclin, C-terminal domain 194 290 IPR004367 -
Lal21g0459 350 CDD CYCLIN 87 184 IPR013763 -
Lal21g0459 350 SMART Cyclin_C_2 194 310 IPR004367 -
Lal21g0459 350 ProSitePatterns Cyclins signature. 87 118 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0459 Lal-Chr21 3255499 3258113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0459 37 330 Core Cell Cycle Gene Families AT2G22490 44.872 5.59e-80 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0459 K18810 - gmx:100803873 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0459 21 3255499 3258113 Lal21g0459 21 3255499 3258113 ECH