Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0454 ATGCAGTTCCCAAACAGAGCAGAAGCAGAACGGTTACTAGGGATAGCGGAAAAGCTATTACAGAACCGCGATCTAACCGGTTCAAAAGACTTCGCAATTCTAGCTCAAGAAACCGAACCGCTTCTAGAAGGTTCTGATCAGATCCTGGCAATCGCCGATGTTCTCACCGCCGCAGAGAAACCACTGAACAATAACCTCGATTGGTACTCCATTCTTCAAGTAGATCGAAGGTGCCAAGACATGGATCTGATTAAGAAGAATTATCGAAGGTTGGCGCTTCTTCTTCACCCTGATAAGAACCCTTTCACTCTCGCTGAACACGCTTTTAAGCTTGTTTCTGATGCTTGGGTTCTTTTATCAGACCCGGTTCAGAAACCGCTTTATGATCAGAACATCGCTATTCTGGTTCAACATGATTTAGGTGTTCAGCAACAAGATAAGTTACCGGTTCGGAGAGGTAACAGTTACGGTTACTGTAACAATAGCACTAGTAATTTTTGGACTGCTTGTCCGTACTGTTATTACATGTATGAGTATCATAGGGGTTATGAGGGTTGTTGTTTGAGGTGTCAAAATTGTGAGAAATCGTTTCACGGTGTCGCGGTTCCGTCAATGCCACCACTTGTGCCGGGCCAGGAGGCTTATTATTGTAGTTGGGGGTTTTTTCCTATGGGATTTGTGTTTGGGACTCCGGGTTCGGAAACTAAGGGGGCGTTACCGTTCCCGAATGCTAACTCGGCTGAGGCTCCTAGTTGGAACCAGCAGCCGTGGTCGCAGCCGCAGCAACAACAGTTGCAGCCGCAGCCGTGGCCACAGCATCAGCCACAGGCTCAGCAGGAGCCGCAGGTAATGTCGCAGCCGCGTTATGAACCGGTTGAACTTGTGGATGATAACAATGGTTGGAATTTTGCTGAGCCTGTGATGAGGGTCAGTGGTGGTAGTGGTGTTTCGAATGGCATTGGTTTGGGAGTGGGATCTGGCGGGAAGAAGCGAGGGAGGCCGAGGAAAGTGGTTTGA 1017 0.4857 MQFPNRAEAERLLGIAEKLLQNRDLTGSKDFAILAQETEPLLEGSDQILAIADVLTAAEKPLNNNLDWYSILQVDRRCQDMDLIKKNYRRLALLLHPDKNPFTLAEHAFKLVSDAWVLLSDPVQKPLYDQNIAILVQHDLGVQQQDKLPVRRGNSYGYCNNSTSNFWTACPYCYYMYEYHRGYEGCCLRCQNCEKSFHGVAVPSMPPLVPGQEAYYCSWGFFPMGFVFGTPGSETKGALPFPNANSAEAPSWNQQPWSQPQQQQLQPQPWPQHQPQAQQEPQVMSQPRYEPVELVDDNNGWNFAEPVMRVSGGSGVSNGIGLGVGSGGKKRGRPRKVV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0454 338 MobiDBLite consensus disorder prediction 246 285 - -
Lal21g0454 338 Gene3D DnaJ domain 54 149 IPR036869 -
Lal21g0454 338 SUPERFAMILY Chaperone J-domain 61 131 IPR036869 -
Lal21g0454 338 CDD DnaJ 67 121 IPR001623 -
Lal21g0454 338 MobiDBLite consensus disorder prediction 238 286 - -
Lal21g0454 338 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 283 - -
Lal21g0454 338 Pfam DnaJ domain 67 129 IPR001623 -
Lal21g0454 338 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Lal21g0454 338 MobiDBLite consensus disorder prediction 312 338 - -
Lal21g0454 338 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lal21g0454 338 PRINTS DnaJ domain signature 88 103 IPR001623 -
Lal21g0454 338 PRINTS DnaJ domain signature 104 124 IPR001623 -
Lal21g0454 338 SMART dnaj_3 66 124 IPR001623 -
Lal21g0454 338 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0454 Lal-Chr21 3212190 3213510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0454 4 252 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 51.575 2.69e-87 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0454 - - lang:109344257 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0454 21 3212190 3213510 Lal21g0454 21 3212190 3213510 ECH