Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0453 ATGCCAACACCGAATAAGAAGCAGAAGAAATCGGTCTATTTCTCTGAGTTAGACGCTGCTACGCTTATTCAAAGGTATGATGCAACGACGGTGTTAACGTTGCTTCAGGAAATAGCACATTATCCTGGTTCGAAGATTGATTGGAATGATTTGGTGAAGAAAACCGCTACTGGCATTTCTAATGCCAGGGAATATCAGATGATCTGGCGCCACTTGGCCTACTGTGATGCTTTGCCTGAAAACCCCGGCGACGTGGCCGAACCTCTGGATGATGATAGTGACCTAGAATGTGAGATGGAAGCATTACCACCCATAAGTGCTGACTCTGCGTCGGAGGCTGCAGCATGTGTGAAGGTAATGATTGCCTCACGCATGTCAAGTACCCCTAGTAGCTCTACGATCGAGGCTCCATTGACTGTAAATGTTCCAGTTTGCCATTCATCTAGAACTTCTAATGATAGTTCAGAGGCCTCCAATTTGATGCAACGGATGAACATTATTTTCCCAGTTACTGTTCAGAGAACACCACTGCCAACTGTATCCTCAACAGAAGGTATAGAAACAAGGGGATTAGGTGGTGGCAACATGGCTTCGAAAAGAAAAAGGTGGTCAGAGGAAGAGGACAATCAACTACGAGCAGCTGTTCAAAGATGGGGTGAAGGGAATTGGGAAACCATGGCAAAAGGAGACAGTTTTACTATGAAGAGAACTCCTATTCAATTGTCTCAGAGGTGGACCCATTTACGGAAGAAAGATGCCAGTACCAATCCAGGTACCAATTCAGTACAAAATCGGCGTTCGACTGCTGAACAGCTGGCAATGAATAATGCAGTATCTTGTGCCCTTGATTTGCCATCAAATACGCTATTCAAAAAGTTTAATGCCCCTGGAGCGACTAATCCTGCTAGTTTTAACAAATCAATTAAAAGCCCTGCACAACCTTCTAATACTGCTGAAGTTCCAATAGTTCGCAGTAACTTAGCTCCAACTCTGAATCCTTCTCAAAAAGTTGTATTGGGATCTTCTGATTTCCCTGCAAAGTCTAAATCAATCCTTGAAAAAACAGTGAAGTGTAATCCAACTCCAGATTCTACAATAAAAGCTAACAGAGTTCCTTCTGGTGCACGTATTGTTTCTTCATCAAATTCCGTGCAGTTTAAGGTTGCTCAAGCTACAAGTAGTTCTTTGGCAAAGTCAACCATTCCTGTTGCTTTGGGTTCCAACCCAAAGTTATCTAATCTTCGCACTGATTCAAGTGTTGCACCTGCATTTGTTCCCTCCAAATCAACTGCTGTTGTCACATGTCCTGCTCCATCCATTAGTACTGTAAAATCTGTATCATCTACATTGAAGAATTCGCCTGTAGCTTTGTCTATATTGTCTGAGTCAGATAAACATGTTGTTTCTGTGGTTAATAAAGTTCCAGTGAAGCAAAAAGTGATTGCCACAGAAGAATTAAAAGTTCCAGTTCCAAGCCCTACAGCAAGTCACAAGGTCCAAGCAGATGAGACTTGTACAGTTAATACTAACAATCATCGCATTCCCGTTCATAGCAACTTGAACGAGGGTAGACAAGATTTGAATCAAGATAAGAGCGTAAATTTGCCTTTACATAAAGGAGGTGAAACTTCTACTGTGAAGAATACAAGTAAGGAAGTTTCAAATGATAAAGCAATCTCACAAAATTCAGGGGTGTGA 1698 0.4199 MPTPNKKQKKSVYFSELDAATLIQRYDATTVLTLLQEIAHYPGSKIDWNDLVKKTATGISNAREYQMIWRHLAYCDALPENPGDVAEPLDDDSDLECEMEALPPISADSASEAAACVKVMIASRMSSTPSSSTIEAPLTVNVPVCHSSRTSNDSSEASNLMQRMNIIFPVTVQRTPLPTVSSTEGIETRGLGGGNMASKRKRWSEEEDNQLRAAVQRWGEGNWETMAKGDSFTMKRTPIQLSQRWTHLRKKDASTNPGTNSVQNRRSTAEQLAMNNAVSCALDLPSNTLFKKFNAPGATNPASFNKSIKSPAQPSNTAEVPIVRSNLAPTLNPSQKVVLGSSDFPAKSKSILEKTVKCNPTPDSTIKANRVPSGARIVSSSNSVQFKVAQATSSSLAKSTIPVALGSNPKLSNLRTDSSVAPAFVPSKSTAVVTCPAPSISTVKSVSSTLKNSPVALSILSESDKHVVSVVNKVPVKQKVIATEELKVPVPSPTASHKVQADETCTVNTNNHRIPVHSNLNEGRQDLNQDKSVNLPLHKGGETSTVKNTSKEVSNDKAISQNSGV 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0453 565 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 5 552 - -
Lal21g0453 565 Gene3D - 195 256 - -
Lal21g0453 565 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 5 552 - -
Lal21g0453 565 MobiDBLite consensus disorder prediction 179 208 - -
Lal21g0453 565 Pfam Myb-like DNA-binding domain 200 246 IPR001005 -
Lal21g0453 565 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 195 253 IPR017930 -
Lal21g0453 565 SMART sant 199 251 IPR001005 -
Lal21g0453 565 ProSiteProfiles Myb-like domain profile. 195 249 IPR001005 -
Lal21g0453 565 MobiDBLite consensus disorder prediction 511 565 - -
Lal21g0453 565 CDD SANT_TRF 201 250 - -
Lal21g0453 565 SUPERFAMILY Homeodomain-like 198 251 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0453 Lal-Chr21 3203538 3210088 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal21g0453 Myb_DNA-binding 6.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0453 - - lang:109328668 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0453 21 3203538 3210088 Lal21g0453 21 3203538 3210088 ECH