Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0441 ATGTCCGCCTTAGGAGTACGGTTACATGTTCAAAATCATTATGTGGTGATGGATAATGGCATACTTCAAGTTACACTGTCAAATCCAGATGGAATCATTACTGGGATACGATATAACGGCGTTGACAATTTGCTTGAAGTTCTTAATAAGGAGACTAATAGAGGGTACTGGGATCTTATGTGGAGTGCACCAGGAAGCAAAGGACTCTTTGATGTGATTAAGGGAACATGTTTTCGAGTTATAGTTCAAAACGAGGAACAGGTGGAGCTTTCATTCACAAGAATGTGGGATCCTTCTCTTGAGGGAGTGTTTGTCCCCTTAAATATTGACAAAAGATTTGTAATGCTCCGGGGTTCATCAGGCTTCTACTCTTATGGAATTTATGAGCACTTAAGTGGATGGCCAGATTTCGAAATGAGTGAAACGAGGATCACTTTCAAGCTTAGAAAAGACAAGTAA 459 0.4009 MSALGVRLHVQNHYVVMDNGILQVTLSNPDGIITGIRYNGVDNLLEVLNKETNRGYWDLMWSAPGSKGLFDVIKGTCFRVIVQNEEQVELSFTRMWDPSLEGVFVPLNIDKRFVMLRGSSGFYSYGIYEHLSGWPDFEMSETRITFKLRKDK 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0441 152 Pfam Rhamnogalacturonate lyase family 9 152 IPR010325 -
Lal21g0441 152 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 152 - -
Lal21g0441 152 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0441 Lal-Chr21 3079071 3087491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0441 1 152 Polysaccharide Lyase AT1G09910 76.316 4.95e-80 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0441 K18195 - gmx:100814185 288.885