Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0439 ATGGAGTTATATGACAATGATTTCTTGGAAGAGTTAATGGCTCTAAGAAGAGAAACATGGGATGCTAATCTAAGCACAGAAGAAAATGAGTTCTTCTCTAATGGCTATAGTTTTGATCAAAACTCTTCACTTTTTCTCCCAAACAACACTTTTTGTGGTCAAGAATTTCCTCAAAGCTACAACAATGAGTATAACTACACCTTCAATGAAATCAATGGCTCTTTACTTAATGAACCATCAGCACTTCAGAATCTTGATTCATATCATGATACCCCTCCATTTCTTGGTCAAGAAGATTTCTCATTTTCCATGATTGAAGGAGAGGATAATACATGTTTTCTTGGTGAAGAGCTTCAGAATTTGGAGCTGCAAAACACATGCAAAATGGAGCCAACACAATCATCAGAAATGGCAGTTTTCAACATAGGAACTGGTCTAGAAAGAAAGAATAGATCAAAGAAGCTTCAAGGGCAACCCTCCAAGAATTTAATGGCTGAGAGGAGAAGAAGAAAGAGATTAAATGACAGACTCTCAATGCTAAGGTCAATTGTCCCAAAGATAAGTAAGATGGATAGAACATCAATTCTTGGAGACACTATTGATTACATGAAAGAACTTCTAGAAAAGATCAACACTTTGAAACAAGAAATAGAAGTAGATGCAAATATGACAGGCATTTTCAAAGATGTAAAACCAAATGAAATCTTGATTAGAAATTCACCTAAGTTTGAGATAGAGAGGAATTTGGACACAAAGGTTGAAATTTGCTGTGTAGGGAAACCAGGCCTGTTGCTTTCTACAGTTAACACACTTGAAGCATTAGGCCTAGAGATTCAACACTGTGTTATTAGTTGTTTCAATGATTTCTCAATGCAAGCTTCTTGCTATGAGGAATTGGAACAAAGGACAATGTTGAGTTGTGAAGATATAAAGCAAGCATTATTTAGAAGTGCAGGATATGGAGGAAGATCTTTGTGA 978 0.3579 MELYDNDFLEELMALRRETWDANLSTEENEFFSNGYSFDQNSSLFLPNNTFCGQEFPQSYNNEYNYTFNEINGSLLNEPSALQNLDSYHDTPPFLGQEDFSFSMIEGEDNTCFLGEELQNLELQNTCKMEPTQSSEMAVFNIGTGLERKNRSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLEKINTLKQEIEVDANMTGIFKDVKPNEILIRNSPKFEIERNLDTKVEICCVGKPGLLLSTVNTLEALGLEIQHCVISCFNDFSMQASCYEELEQRTMLSCEDIKQALFRSAGYGGRSL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0439 325 PANTHER DNA BINDING PROTEIN 3 325 - -
Lal21g0439 325 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 3 325 - -
Lal21g0439 325 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 157 206 IPR011598 GO:0046983
Lal21g0439 325 Coils Coil 203 223 - -
Lal21g0439 325 CDD ACT_UUR-ACR-like 251 292 - -
Lal21g0439 325 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 219 IPR036638 GO:0046983
Lal21g0439 325 Gene3D - 147 221 IPR036638 GO:0046983
Lal21g0439 325 Pfam Helix-loop-helix DNA-binding domain 163 206 IPR011598 GO:0046983
Lal21g0439 325 SMART finulus 163 212 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0439 Lal-Chr21 3061477 3063727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0439 89 325 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 53.306 2.70e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal21g0439 HLH 6.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0439 - - gmx:100784380 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0439 21 3061477 3063727 Lal21g0439 21 3061477 3063727 ECH