Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0436 ATGTCTTTTCCTAATACCCAAACTACCCCTCACCCTCAACGCCACCACCACTCTAAACCACCGCTTCCATCCCAAAGGGTCCCACTCACACAGTTACTCAAAGTTGCTTCCGTTGCCGGTGGCATTCAGTTCGGGTGGGCCCTACAGCTTTCTCTTCTAACTCCCTACGTTCAACAGCTCGGTATTCCACACGCGTGGGCCAGTATTATATGGTTATGTGGGCCCCTCTCTGGGCTTTTTATTCAGCCTTTGGTGGGCCTTCTTAGTGACCGGTGTACTAGTCGCTTTGGTCGCCGGAGACCGTTTATATTAGGCGGAGCTCTGTCTATTATTTTGTCCGTTCTCGTTATTGGTCATGCTGCTGATGTCGGGTGGTGGTTTGGTGATACAGTGAATCATCGGCCATGGGCTGTCGCGGTTTTCGTGTTCGGGTTTTGGATTTTGGATGTGGCTAATAATGTAACTCAAGGTCCTTGTAGAGCTTTGCTTGGTGATCTCACTGGCAAGGATCATCGAAGGACACGTGTTGCAAATGCTTATTTCTCCCTGTTTATGGCTATTGGTAACATTCTTGGCTATGCAACTGGAGCATACAGCGGTTGGTACAAGGTCTTTCCTTTCACACTTACCTCTGCATGCAATATTAGTTGTGCAAATCTCAAGTCGGCTTTCTTTCTCGACATTGGTTTTATTGCGGTCACCACCTATATCAGTATCATGGCAGCTCATGAAGTGCCTCTAAGTTCAAGTGAGGCTACTCATGGTGGAGAAACAGCAGGGGAGTCAGGTAGCACGGAAGAAGCCTTCATGTGGGAGCTATTCGGGACATTCAGATATTTTTCGGCCCCTGTATGGACAATACTATCTGTTACTGCACTAACATGGATTGGCTGGTTTCCGTTTCTTCTCTTCGACACTGACTGGATGGGCCGAGAGATTTATGGTGGCGAGCCAAATCAAGGCCCTAATTATGACAGTGGAGTTAGAATGGGGGCACTTGGCTTATTGCTTAATTCAGTTGTTCTTGGAATAACATCATTGTTCATGGAGAGGCTATGCAGGAATCGGGGGCCTGGGTTTGTGTGGGGAATCTCAAATATCATAATGGCCATCTGCTTTGTTGGAATGCTTGTAGTGACTTATGTAGCAAGTAACATTGGCTATTTAGGCACAGATCTCCCACCAATTGGCATCGTGTTCGCAGCGTTGTTAATCTTTACCATCCTTGGGTTTCCACTAGCTATCACTTACAGTGTTCCATATGCCTTAATTTCCACACATATCCAGTCATTGGGACTAGGCCAAGGATTATCAATGGGAGTCCTAAATCTTGCAATAGTGATCCCACAGATGATTGTGTCCCTGGGAAGTGGACCATGGGATCAGCTATTTGGTGGAGGAAACTCTCCAGCCTTTGCTGTAGGAGCTGTTGCAGGCCTTGTTGGTGGACTCATAGCTGTCTTCGCCATTCCCCGACCCGGTGGTCAAAAGCTTAGAAGCCAAGTATGA 1509 0.4738 MSFPNTQTTPHPQRHHHSKPPLPSQRVPLTQLLKVASVAGGIQFGWALQLSLLTPYVQQLGIPHAWASIIWLCGPLSGLFIQPLVGLLSDRCTSRFGRRRPFILGGALSIILSVLVIGHAADVGWWFGDTVNHRPWAVAVFVFGFWILDVANNVTQGPCRALLGDLTGKDHRRTRVANAYFSLFMAIGNILGYATGAYSGWYKVFPFTLTSACNISCANLKSAFFLDIGFIAVTTYISIMAAHEVPLSSSEATHGGETAGESGSTEEAFMWELFGTFRYFSAPVWTILSVTALTWIGWFPFLLFDTDWMGREIYGGEPNQGPNYDSGVRMGALGLLLNSVVLGITSLFMERLCRNRGPGFVWGISNIIMAICFVGMLVVTYVASNIGYLGTDLPPIGIVFAALLIFTILGFPLAITYSVPYALISTHIQSLGLGQGLSMGVLNLAIVIPQMIVSLGSGPWDQLFGGGNSPAFAVGAVAGLVGGLIAVFAIPRPGGQKLRSQV 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0436 502 PANTHER SUGAR TRANSPORTER 19 500 - -
Lal21g0436 502 TIGRFAM GPH_sucrose: sucrose/H+ symporter 27 493 IPR005989 GO:0005887|GO:0008515|GO:0015770
Lal21g0436 502 SUPERFAMILY MFS general substrate transporter 36 498 IPR036259 -
Lal21g0436 502 Pfam MFS/sugar transport protein 47 242 - -
Lal21g0436 502 MobiDBLite consensus disorder prediction 1 23 - -
Lal21g0436 502 Gene3D MFS general substrate transporter like domains 31 490 IPR036259 -
Lal21g0436 502 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 19 500 - -
Lal21g0436 502 CDD MFS_SLC45_SUC 32 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0436 Lal-Chr21 3031311 3035496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0436 8 497 Sucrose Transporter Gene Family AT1G09960 68.442 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0436 K15378 - gmx:100787939 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0436 21 3031311 3035496 Lal21g0436 21 3031311 3035496 ECH
Lal17g0346 17 2234604 2240455 Lal21g0436 21 3031311 3035496 LSH