Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0429 ATGGCGATCGCAACAGAGACACAACAACTTCAATCTCAATCTCAACAACACAAGGCTTCTTCAGACGTTTCAGCTGGAGAGCAAAGAAGGTGGACCCTCAATGATTTTGATATTGGAAAACCTCTTGGAAGGGGAAAATTCGGCCATGTCTATCTGGCTAGAGAAAAGAGGAGTAATCATATTGTTGCGCTGAAAGTGCTCTTCAAGAGCCAATTGCAACAATCACAAGTTGAGCATCAGCTTCGTAGAGAAGTTGAAATTCAAAGTCATCTCAGACACCCCCACATCTTACGCCTTTATGGATATTTTTATGATCAGAAAAGAGTTTATTTGATTTTGGAGTATGCGCCTAAAGGTGAACTTTACAAGGAATTACAGAAATGCAAACATTTCAGTGAAAGACGTGCAGCCACTTATGTTGCATCACTGGCCCGGGCCCTTATATATTGTCATGGCAAGCATGTAATACACAGGGACATCAAACCAGAGAATCTTCTAATTGGTGCACAGGGTGAACTAAAGATAGCCGACTTCGGATGGTCAGTGCATACATTCAATCGCAGGCGGACCATGTGTGGTACACTGGATTACCTCCCTCCCGAGATGGATGATAGTTACATCACTATATTAACTTCTAAACACTTTATATTTCCAACAGTGGAGAGTACAGAACATGACGCAAGTGTGGATATCTGGAGCCTTGGTATTCTGTGCTACGAGTTTCTTTATGGAGTTCCGCCTTTTGAGGCAAAAGAACATTCTGATACTTATAGGAGGATTGTACAAGTGGATCTCAAGTTTCCTCCTAAACCAATCGTGTCTTCTGTGGCAAAGGACCTAATCAGCCAGATGCTTGTCAAGGATTCTACTCAGCGTCTACCGCTGCACAAGCTTCTTGAACATCCTTGGATTGTTCAGAATGCAGAGCCCTCAGAGATGCTGCAAACTATTGGAAGAATTGCGGTTAAGAAGATGCAGAAGGTTAAGAATTTGGTATTTCAAAATGTATTTGATGGAGAGCTCCATCCACCACTTTTGCATACATTCTTATCCCAAGCTATCACTTATGTGATTGTAAACCCTGCATACAAAGAATTGCATGGCTTGTTCATCTTCATGGAGATCAGAATCATTGGTAATCTCAATCAGAAGAAATAA 1158 0.4162 MAIATETQQLQSQSQQHKASSDVSAGEQRRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPHILRLYGYFYDQKRVYLILEYAPKGELYKELQKCKHFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMDDSYITILTSKHFIFPTVESTEHDASVDIWSLGILCYEFLYGVPPFEAKEHSDTYRRIVQVDLKFPPKPIVSSVAKDLISQMLVKDSTQRLPLHKLLEHPWIVQNAEPSEMLQTIGRIAVKKMQKVKNLVFQNVFDGELHPPLLHTFLSQAITYVIVNPAYKELHGLFIFMEIRIIGNLNQKK 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0429 385 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 1 313 IPR030616 GO:0004672
Lal21g0429 385 CDD STKc_Aurora 35 305 - -
Lal21g0429 385 Gene3D Phosphorylase Kinase; domain 1 24 119 - -
Lal21g0429 385 Pfam Protein kinase domain 38 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0429 385 SMART serkin_6 36 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0429 385 Gene3D Transferase(Phosphotransferase) domain 1 120 336 - -
Lal21g0429 385 MobiDBLite consensus disorder prediction 1 26 - -
Lal21g0429 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Lal21g0429 385 ProSiteProfiles Protein kinase domain profile. 36 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0429 385 SUPERFAMILY Protein kinase-like (PK-like) 24 325 IPR011009 -
Lal21g0429 385 ProSitePatterns Protein kinases ATP-binding region signature. 42 65 IPR017441 GO:0005524
Lal21g0429 385 PANTHER SERINE/THREONINE-PROTEIN KINASE AURORA-1 1 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0429 Lal-Chr21 2970155 2972947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0429 36 313 EF-hand Containing Proteins AT5G12180 35.915 2.19e-51 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Lal21g0429 Pkinase 6.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0429 K08850 - gmx:100775451 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0429 21 2970155 2972947 Lal4g0293 4 1914465 1917529 LSH