Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0396 ATGGTTTCTTTGGAAACAAAATCTAATCAAATGGAAAGGGAACGAACCCGAAAACGCCCTCGTCTCGCTTGGGATATTGCCCCTCAGTCACAAAGAGATGTGGTGGTGGCGGGTGATGAAGGAATCGAAAAAAGGCATGCTTCTCCTCCGAAAAGGAACGATGATCGTGAAGGCCATTATGTTTTTGTTCTCGGTGAAAATATTACTCCTAGATATAAAATCCTCAGCAAGATGGGTGAAGGCACATTTGGTCAAGTTCTGGAATGTTGGGATCGCCAAACCAAAGAGTACGTGGCTATCAAGGTAATTAGAAGCATAAGGAAATACCGTGATGCAGCGATGCTCGAGGTTGATGTACTTCAACAAATAGCAAAGAATGATATAGGAAACTCACGCTGTGTGCAGATGCAGAACTGGTTTGATTACCGAAATCACATATGCATTGTCTTTGAGAAGCTTGGACCAAGTTTATTTGATTTTCTAAAGAGAAATAAATACTGCCCATTCCCCGTGGATCTTGTTCGGGAATTTGGACGTCAGCTTTTGGAATCTGTAGCATATATGCACGAACTACACCTAATCCACACTGATTTGAAGCCAGAAAATATACTTCTTGTTTCTTCTGAATATGTAAAGCTCCCTAGTTGTAAGAAGAGGGTCTCGTCAGATGAGACACAGTTCAGGTGCTTGCCCAAGTCTAGTGCTATTAAGCTCATTGATTTTGGTAGTGCTGCATTTGATAATCAGAGTCATAGCTCCATTGTTTCTACAAGGCATTACAGAGCCCCAGAGATTATTCTAGGTCTAGGGTGGTCATACCCATGTGATTTATGGAGTATTGGATGTATCCTCATCGAACTATGCTCGGGTGAAGCATTATTTCAGACTCATGAAAACTTGGAGCACCTGGCAATGATGGAGAGAGTGTTGGGACCTCTACCAGAGCACATGGCTCGAAGGTCCAATCGAGGTGCCGAAAAGTACTTCAGGCGTAGTTCACGACTAAATTGGCCTCAAGGAGCTGTTTCAAGGGAGAGCATTCGTGCAGTGAAGAAGCTCGACCATCTTAAGGACATTGTATCACGACACGTGGATTCGTCAAGGTCATCTTTAACTGACTTATTACATGGATTATTGAGGTATGATCCGAGTGAACGTTTAACAGCTCGCCAAGCCCTTGATCATCCCTTCTTTCGGACTCCGGCTTAA 1209 0.4342 MVSLETKSNQMERERTRKRPRLAWDIAPQSQRDVVVAGDEGIEKRHASPPKRNDDREGHYVFVLGENITPRYKILSKMGEGTFGQVLECWDRQTKEYVAIKVIRSIRKYRDAAMLEVDVLQQIAKNDIGNSRCVQMQNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHELHLIHTDLKPENILLVSSEYVKLPSCKKRVSSDETQFRCLPKSSAIKLIDFGSAAFDNQSHSSIVSTRHYRAPEIILGLGWSYPCDLWSIGCILIELCSGEALFQTHENLEHLAMMERVLGPLPEHMARRSNRGAEKYFRRSSRLNWPQGAVSRESIRAVKKLDHLKDIVSRHVDSSRSSLTDLLHGLLRYDPSERLTARQALDHPFFRTPA 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0396 402 ProSiteProfiles Protein kinase domain profile. 72 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0396 402 Gene3D Phosphorylase Kinase; domain 1 59 152 - -
Lal21g0396 402 Gene3D Transferase(Phosphotransferase) domain 1 126 398 - -
Lal21g0396 402 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 45 398 - -
Lal21g0396 402 SUPERFAMILY Protein kinase-like (PK-like) 59 400 IPR011009 -
Lal21g0396 402 MobiDBLite consensus disorder prediction 37 56 - -
Lal21g0396 402 MobiDBLite consensus disorder prediction 8 22 - -
Lal21g0396 402 MobiDBLite consensus disorder prediction 1 56 - -
Lal21g0396 402 PANTHER BNAA07G37640D PROTEIN 45 398 - -
Lal21g0396 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Lal21g0396 402 Pfam Protein kinase domain 72 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0396 402 SMART serkin_6 72 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0396 402 CDD PKc_CLK 59 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0396 Lal-Chr21 2702541 2707717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0396 71 399 Core Cell Cycle Gene Families AT3G48750 28.024 4.98e-28 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Lal21g0396 Pkinase 2.2e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0396 K08287 - gmx:100782453 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0396 21 2702541 2707717 Lal21g0396 21 2702541 2707717 ECH