Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0395 ATGGAAGGGAAACGTGGAAAGGAGGAAACCCTACCACCTGGATATCGATTTCATCCTTCTAATGAAGAACTCATTACTTATTATCTCATGAATAAAATATCAGATTCTAACTTTACAAGTAGAGCAATAACTGATGTTGATCTCAACAAATGTGAGCCTTGGGAGCTGCCAGGGAAGGCAAAGATGGGAGAAAAAGAATGGTACTTCTTTAGTATGAGAGATCGCAAGTACCCCACAGGAGTGAGAACCAATCGAGCAACAAACACTGGATACTGGAAAACAACAGGGAAAGACAAAGAGATCCTTAACAGTGTTACATCTGAATTGGTTGGTATGAAGAAAACTCTAGTTTTCTACAAAGGTAGAGCTCCCAGAGGAGAAAAAAGCAATTGGGTTATGCATGAATACCGCATTCACTCAAAGTCTAGTTTCAGAAATACCAAGGATGAATGGGTAGTGTGCCGCGTATTCCAAAAAAGTGGTGGTGTCAAAAGGTACCCTAACTCCAACCATTCAACAAGGGTAGTGAACCCTTATAGCATGGAACTAGGTCCCAATACGGTGGCACAACCATTGATTCAGTTAGGAGATCCTGCTACTCATCATCATTTCCTTTATGGAAGGAACTACTTGAGCAATGCTGAGTTAGGTGAAGTTACTAGGGTTTTAAGAAGGGTTGGATCAACCACTACTAATAATTTCAACCTACCAATGCAATCCCAGTTGAACTACCCAGTAACTGAAGCAGGAGGAGGATTCACCATTTCAGGACTTAATTTGAATCTTGGAGGAGGAGGAGCACTAGCAGCTATGGCACAACCTATATTCCGGCCAATGCAACCGCCGCAGCCGCCTCTGGCTCAGGCAATGGCTCAAGTACATGATGTGAGTTCTAACATGATGATGACTGCAGCAACTAATTCTTTTGGTGCAGAGAATGTAGTTGGTTATGGTACTGCAGAAATGAGTAACACAATTAATCTTAATGGGAATAGGTTTGTGGGCATGGAACATTGCATGGATCTTGACAACTATTGGCCTTCCTACTAA 1050 0.421 MEGKRGKEETLPPGYRFHPSNEELITYYLMNKISDSNFTSRAITDVDLNKCEPWELPGKAKMGEKEWYFFSMRDRKYPTGVRTNRATNTGYWKTTGKDKEILNSVTSELVGMKKTLVFYKGRAPRGEKSNWVMHEYRIHSKSSFRNTKDEWVVCRVFQKSGGVKRYPNSNHSTRVVNPYSMELGPNTVAQPLIQLGDPATHHHFLYGRNYLSNAELGEVTRVLRRVGSTTTNNFNLPMQSQLNYPVTEAGGGFTISGLNLNLGGGGALAAMAQPIFRPMQPPQPPLAQAMAQVHDVSSNMMMTAATNSFGAENVVGYGTAEMSNTINLNGNRFVGMEHCMDLDNYWPSY 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0395 349 ProSiteProfiles NAC domain profile. 11 159 IPR003441 GO:0003677|GO:0006355
Lal21g0395 349 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 346 - -
Lal21g0395 349 Gene3D NAC domain 20 162 IPR036093 GO:0003677|GO:0006355
Lal21g0395 349 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 2 346 - -
Lal21g0395 349 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Lal21g0395 349 SUPERFAMILY NAC domain 9 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0395 Lal-Chr21 2691676 2694248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0395 5 349 NAC Transcription Factor Family AT2G24430 50.681 1.81e-109 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal21g0395 NAM 1.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0395 - - gmx:100805060 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0395 21 2691676 2694248 Lal21g0395 21 2691676 2694248 ECH
Lal21g0395 21 2691676 2694248 Lal4g0265 4 1719079 1721621 LSH