Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0388 ATGGTTCATAAAAGAGAATATTGTTGTTATCTTCTAATGCTAGTGTTAGCCACTTATTTTATGCCATCTTTGGGTGACACAACAACTCAAGCTCTAGTGAAGTTCAAAAGCTTCTTGTCCAATGCTGATGCATTAAACAAATGGGGTGATGAGGCTATTAGTGTGTGTAGTTGGGTTGGTATATTATGCACCAATCAAACATTTTATGGCTTGAGACTTGAGAACATGGGATTAAGTGGAAATATTAACATAGACACCCTTTTGGAGTTGCCAAATTTGGTTAGCTTTAGTGTCATTAACAACAACTTTGAGGGTCCAATGCCTGAATTCAAAAGGATTGTGAGTTTAAGGGCATTGTTTCTAACCAATAACAAATTCTCTGGTCATATTCCTGATGATGGTTTTCAAGGAATGAGAAGGTTGAAAAGGGTGTTCTTGGCAGAAAATGGTTTCAAGGGTCATATTCCTAGATCACTTGCAAAATTGCCTGGACTTTTAGATGTGGATTTGCATGCCAATAGTTTTCAAGGCAATATACCACAGTTTCAACAGAGGCATTTCAGAGTGTTTAGTTTAGTCAATAACCAATTGGTGGGTCCAATACCAGAAAGCTTAAGCATTGTTGATCCAAGTTCATATGCTGGCAACAACGGTCTATGTGGAAAACCTCTAAGCCAACCCTGCATGAGAAGCACCACACCAAATTTCATGCTTCCACATGAAGAAAAAGAAAACAGGAAACAACGTACCCTTTTCACAGCTATCACAGTGATGACTGTGATTGTCTTAGCTTCAATACTCACACTTATATTCATCCATTTCCACAGAAGGAAACGTGCACAACACTCAACAACAGTTGAAGAGGCACAAGTAAAATCATACCGAAGCATTAGTACAGTTTCAAGTGAGTCCAAATCCATTCTAGTAGCATCTGGTAAATCCAAGAAGAAAAATGAAGATGCAGACTTTAGCTTTGTTAGGAAAGAGGGTAAGGAGTTTGATTTGCAAGACTTGCTTAAGGCCTCAGCTGAGGTTCTTGGCAGTGGAAGTTTTGGATCAACCTATAAGGCAATGGTTCTGAATGGACCAGTTGTGGTGAAGAGATTTAAGCAGATGAGTAATGTTGGGAAACAACAGTTTTTTGATCATATGAAAAGGCTTGGAAGGTTGAGACATACTAATATACTCCCTCTTATTGCATTCTACTATGGAAAAGAAGAGAAGCTTTTGGTTTATGAATTCGCCGAAAATGGAAGTCTGGCTAGTCATCTTCATGGTAGACGTGGTTCTAAATTGGACTGGCCAACACGTTTGAAGATCATAAAAGGAGTAGCAAGGGGCTTAGCACACTTATATGAAGAGTTCCCAGACCAGAAACTATCCCATGGGCATCTGAAATCGTCGAATGTGGTGCTAGACCGATCATTCGAGGCGCGTTTGACAGAGTATGGACTAGTGCCAGTGGTGAACAAGAAGCATGTTCAACAGTTCATGTGTTCATCAAAGTCCCCAGAGGTGAGCCAGTATGAGAAGCCAAGTGAGAAAACTGATGCATGGTGTTTAGGGATATTGATTTTGGAACTCCTGACAGGGAAGTTTCCAGCAAGTTATGTGAGGCATGGGAAAGGAGCAAGTGAAGAATTAGAGACATGGGTTAAGTCAATAGTGAAGGAAGGGTGGGGTGGTACTGGTGATGTTATTGATAATGAGCTTTTGGTAGAGAAAAATTGTGAGGCTGAAATGTTGAAGCTGTTGAGAATTGGAATGAGTTGTTGTGAGTGGAGTTTGGAGAATAGGTTGGGTTGGAGAGAGGCAGTGGTTAAGATTGAAGAGTTGAATGTGAATGATCATGATGGAAATTAA 1863 0.401 MVHKREYCCYLLMLVLATYFMPSLGDTTTQALVKFKSFLSNADALNKWGDEAISVCSWVGILCTNQTFYGLRLENMGLSGNINIDTLLELPNLVSFSVINNNFEGPMPEFKRIVSLRALFLTNNKFSGHIPDDGFQGMRRLKRVFLAENGFKGHIPRSLAKLPGLLDVDLHANSFQGNIPQFQQRHFRVFSLVNNQLVGPIPESLSIVDPSSYAGNNGLCGKPLSQPCMRSTTPNFMLPHEEKENRKQRTLFTAITVMTVIVLASILTLIFIHFHRRKRAQHSTTVEEAQVKSYRSISTVSSESKSILVASGKSKKKNEDADFSFVRKEGKEFDLQDLLKASAEVLGSGSFGSTYKAMVLNGPVVVKRFKQMSNVGKQQFFDHMKRLGRLRHTNILPLIAFYYGKEEKLLVYEFAENGSLASHLHGRRGSKLDWPTRLKIIKGVARGLAHLYEEFPDQKLSHGHLKSSNVVLDRSFEARLTEYGLVPVVNKKHVQQFMCSSKSPEVSQYEKPSEKTDAWCLGILILELLTGKFPASYVRHGKGASEELETWVKSIVKEGWGGTGDVIDNELLVEKNCEAEMLKLLRIGMSCCEWSLENRLGWREAVVKIEELNVNDHDGN 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0388 620 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 618 - -
Lal21g0388 620 ProSitePatterns Protein kinases ATP-binding region signature. 346 367 IPR017441 GO:0005524
Lal21g0388 620 Gene3D Ribonuclease Inhibitor 25 185 IPR032675 -
Lal21g0388 620 Gene3D Phosphorylase Kinase; domain 1 305 414 - -
Lal21g0388 620 SUPERFAMILY Protein kinase-like (PK-like) 344 612 IPR011009 -
Lal21g0388 620 Pfam Protein kinase domain 344 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0388 620 PANTHER LRR RECEPTOR-LIKE KINASE 9 618 - -
Lal21g0388 620 Gene3D Ribonuclease Inhibitor 188 228 IPR032675 -
Lal21g0388 620 Gene3D Transferase(Phosphotransferase) domain 1 415 619 - -
Lal21g0388 620 Pfam Leucine rich repeat N-terminal domain 29 63 IPR013210 -
Lal21g0388 620 ProSiteProfiles Protein kinase domain profile. 340 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0388 620 SUPERFAMILY L domain-like 40 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0388 Lal-Chr21 2642008 2644832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0388 9 613 Receptor kinase-like Gene Family AT4G31250 44.992 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal21g0388 Pkinase 1.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0388 - - gmx:100803999 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0388 21 2642008 2644832 Lal21g0388 21 2642008 2644832 ECH