Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0387 ATGAAATCATGGATTCAAATTCTGGAAACATTATCGATCTCTACATGTGAGGTTACAACAGAGCTTATAAAAAAGAGGGAGGAAAAAAATCTGTTACTCTCTTCAGTTCTGATGGCAGGGCTGAATTTTGAAGCTGAATATGGTGACAGCCATAATATTCTGAAGGCATTATCAGATGAAGGTGTTGAGTTCCTTTTATCTTGTGATGAAAGGAAGGTACCTTTGTCAGAATGCAATGGAAAAATTATTTGCCTATTTTTCTCTGCAAATTGGTGCAGACCATGCAGAGGATTCATTCCTCACCTGGTTGAACTTTATGATACACTTAGAAAGAGAGGCATAAGTCTAGAGATCATTTTCGTCTCGTTTGATCGCGAGGAGGGTGGATTTAATGAACACTTGAAGAGTATGCCATGGCTAGCCGTCCCGTTTGATGTAAATTTGCATAGAAGATTGATTGACAGATACCGAGTTGATCGAATCCCATCCTTCATTCCATTATGTTCAGATGATGACATAACTGTTGAAGACTTGATTGGTTGTATTGAGGATTATGGTGCCAATGCATTTCCTTTCACAAGGAAGAGGCATGAGGAATTGAAAGCCGTAGATAAAATGAAACGCGAAGAAGCAAATTTGGAAGAATTATTGGCACAGGAAGGATGCAACTTTCTCATATCTGGAGATGATATAAAGGTACCTGTATCGGAACTAACTGATAAAACTATAGGCCTATACTTTAGTGCTTACTGGTCCCCTCCTTGTCGTTCCTTCACGATCCAACTCACCGATGTGTACAACAATCTCAATGCCGCGAAAAGCAGTCACTACTTCGAGATTGTTTTAATCTCAACAGATAGAGACCTTAAGGAATTCAATATCAACAGAAGTAGCATGCCATGGCTTGCTATTCCATATGAGGATAGAAAAAGGCATGATCTTTGCAGAATCTTCGATATAAAAGGAATTCCGGCTTTGGTTCTCATAGGACCAGATGGCAAAGTGATTAGTGAGAATGGCAAGTTTATGGTCTCCTCGTATGGTGCCGATGCTTATCCGTTTACCGAGTCGCGGATTAGGGACCTAGAAGCAGCTCTGAGAAAGCAAGGAGAGACTTTGCCTCAACAAGTTGAAGATATTAAGCATGAACATGTGTTGAAATTGGATATGGCCAAAGCTTATCATAAGATTTTGAAGATTGAAAAGTGTTTTGGAAGAGAAAAAAAGAAAGCAATGTGGTTGCCAAAGAATAATGCTGAGATGAAGGATGGTGTGAATGGATTGGTGGCAGTGGCAATAGATAAAGAAAAAGGGAGCCAAAATGCACTTAAATGGACCATTGATCATCTTCTCAATAGAAGTTCAACTGTGTTTCTCATCCATGTTAAGCTTAAGCCAGGCTCTCTTTCTACATCACCTTCTCTTTTTGGCCAAAGGTCAGTGATGCATATTGGTGATGAGGGTTCAGTGGGAAAAACAGACCCTGATGCCCTTAACAAAAATATTTTCCTCCCATATCGCGTCTTTTGTACAAGGAAAGATATACAATGCAAGGACGTGCTACTAGAAGATGTAGATGTATCCAAAGCTTTGATTGAATACGTTTCTAATGCAGGAATTGAGCATCTGGTTCTTGGATCCTCAACCAAAGCTGGTTTGTTTAGAAAATTCAAGGTATTAGATATTCCCGGAACTGTCTCAAAAGGGGCACCAGATTTCTGTACAGTCTACGTAGTTGCTAAGGGAAAGATTCATTCAATGCGATCTGCTACTCGTGCTGCTCCAGTTGTTTCTACTATGCTTAGCCAGTTCAGTCAAGATAGTGCCAAGTCAGAACCATTGGAGCCACATGTGCCAGTGGTTGCTGCTAGTGTGAAAGAACCTGAATGGCGACCCGCGAATGCTACACTACATGAATCACAGGACGGTACAGAATTATTCAGGTCACCATTCACTAGGAAAGGTTACACTGGTAGGTCATATGCGGAAAGTTCAATTCCAGATAGTGACATATCTTTCGTAAGCTCCGGAAGGCCTAGTGAAGATTGCATGTTCCCTTCGTTATATAGCAACTCGGATACAACTATATCCAACTCTCGACTATCATATAGCTCAGACACGGATGGAAACTATAGCTTCGAGTCTATACCTTATGGAAGGAAGTCGGTGGAAGTTGGAACTCCTCCTGAATTCACATCTCTCTCATTTGAAAGTGATAGGCTTTCAACTTCTGCATCACAAGCTGTGGATGATGTGGAGGCTGAAATGAGGAGACTGAAGTTAGAGCTCAAGCAAACAATGGAAATGTATAACACGGCATGTAAAGAGGCACTTACAGCGCAGCAGAAGGCAGTAGAACTTCAACGTTGGAAATTAGAGGAAGAGAGAAGATTAGAAGAGGCAAGGCTCGCTGAGGAGGCTGCGTTGGCGATTGCAGAAAAGGAGAAGGCCAAATCTAAAGCAGCAATTGAGGCAGCTGAAGCACAAAAGAGGATTGCAGAACTAGAAGCACAGAAGAGACTTAATGCAGAAATGAAAGCACTTAAAGAAGCAGAAGAGAAAAGAAGAGCACTTGATGCTTTAGGAAACATAGATGTCAGGTATAGAAGGTATTCAATCGAGGAGATTGAAGCTGCAACAGAGTTTTTCGCAGAGTCCTTAAAGATTGGAGAGGGAGGTTATGGTCCAGTTTTTAAGTGCCTTCTGGAGCATACACCTGTTGCAGTGAAGGTTTTGCGTCCTGATGCAGCACAAGGAAGGTCACAGTTTCAAAGAGAGGTTGAGGTACTAAGCTGCATACGGCATCCAAATATGGTTCTCCTCCTAGGAGCCTGTCCCGAATATGGGTGCCTTGTGTATGAGTACATGGCTAATGGAAGCTTGGATGATCGCCTATTTCGTCGCAGCAACACTCCTCCACTTCCTTGGCAGGCCAGGTTCAAAATTGCAGCTGAAATTGGCACTGGCTTGTTGTTCCTTCACCAAACAAAACCAGAACCTTTAGTGCACAGGGACCTGAAACCAGCCAACATCTTGCTTGACGGCAACTATGTGGCCAAAATCAGTGATGTTGGTTTGGCAAGGCTAGTTCCACCATCTGTGGCAGATAGTGTGACACAATATCGCATGACATCCACGGCCGGAACTTTTTGCTATATAGATCCTGAGTATCAGCAGACAGGAATGTTGGGTGTAAAATCAGACATATACTCCCTCGGGATCATTTTCTTGCAACTTCTGACAGCAAAGTCTCCAATGGGATTGGCACATCATGTTGAAGGGGCCATTGAGAAGGGAACTTTTACTGAGATGTTGGATCCAACAGTGCCTGACTGGCCAGAAGAAGAAACCTTAAGCTTCGCAAAGATGGCAGTGCAGTGTGCCGAATTAAGGCGGCGAGACAGACCTGATCTTGGCAAGGTTGTCCTACCAGAACTCAACAAGCTAAGAGAAATTGCTGAAAATAGTAATCTTCATTCAGTGTTGGGTGGCTATGTAAATGTGCATCACCAGAGTCAAGTTTCTTTACAGCTTGTGAGTTCTTCTATATTATTTCTGCTATATGTTCAAGACTTAAGAAGGAAGCTCTCCACTACCTGTTTCAGGAGACAATTGAAGAAACACACAAGGTGA 3633 0.4239 MKSWIQILETLSISTCEVTTELIKKREEKNLLLSSVLMAGLNFEAEYGDSHNILKALSDEGVEFLLSCDERKVPLSECNGKIICLFFSANWCRPCRGFIPHLVELYDTLRKRGISLEIIFVSFDREEGGFNEHLKSMPWLAVPFDVNLHRRLIDRYRVDRIPSFIPLCSDDDITVEDLIGCIEDYGANAFPFTRKRHEELKAVDKMKREEANLEELLAQEGCNFLISGDDIKVPVSELTDKTIGLYFSAYWSPPCRSFTIQLTDVYNNLNAAKSSHYFEIVLISTDRDLKEFNINRSSMPWLAIPYEDRKRHDLCRIFDIKGIPALVLIGPDGKVISENGKFMVSSYGADAYPFTESRIRDLEAALRKQGETLPQQVEDIKHEHVLKLDMAKAYHKILKIEKCFGREKKKAMWLPKNNAEMKDGVNGLVAVAIDKEKGSQNALKWTIDHLLNRSSTVFLIHVKLKPGSLSTSPSLFGQRSVMHIGDEGSVGKTDPDALNKNIFLPYRVFCTRKDIQCKDVLLEDVDVSKALIEYVSNAGIEHLVLGSSTKAGLFRKFKVLDIPGTVSKGAPDFCTVYVVAKGKIHSMRSATRAAPVVSTMLSQFSQDSAKSEPLEPHVPVVAASVKEPEWRPANATLHESQDGTELFRSPFTRKGYTGRSYAESSIPDSDISFVSSGRPSEDCMFPSLYSNSDTTISNSRLSYSSDTDGNYSFESIPYGRKSVEVGTPPEFTSLSFESDRLSTSASQAVDDVEAEMRRLKLELKQTMEMYNTACKEALTAQQKAVELQRWKLEEERRLEEARLAEEAALAIAEKEKAKSKAAIEAAEAQKRIAELEAQKRLNAEMKALKEAEEKRRALDALGNIDVRYRRYSIEEIEAATEFFAESLKIGEGGYGPVFKCLLEHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDRLFRRSNTPPLPWQARFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDGNYVAKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQLLTAKSPMGLAHHVEGAIEKGTFTEMLDPTVPDWPEEETLSFAKMAVQCAELRRRDRPDLGKVVLPELNKLREIAENSNLHSVLGGYVNVHHQSQVSLQLVSSSILFLLYVQDLRRKLSTTCFRRQLKKHTR 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0387 1210 Coils Coil 742 769 - -
Lal21g0387 1210 SUPERFAMILY Thioredoxin-like 231 337 IPR036249 -
Lal21g0387 1210 SMART serkin_6 883 1146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0387 1210 Gene3D Transferase(Phosphotransferase) domain 1 956 1163 - -
Lal21g0387 1210 Gene3D Glutaredoxin 64 196 - -
Lal21g0387 1210 ProSiteProfiles Thioredoxin domain profile. 45 208 IPR013766 -
Lal21g0387 1210 CDD STK_N 428 582 - -
Lal21g0387 1210 Pfam Thioredoxin-like 241 335 IPR012336 -
Lal21g0387 1210 Pfam Thioredoxin-like 80 165 IPR012336 -
Lal21g0387 1210 Coils Coil 196 223 - -
Lal21g0387 1210 PANTHER UNIVERSAL STRESS FAMILY PROTEIN 416 1195 - -
Lal21g0387 1210 ProSiteProfiles Thioredoxin domain profile. 215 364 IPR013766 -
Lal21g0387 1210 Gene3D Glutaredoxin 218 356 - -
Lal21g0387 1210 SUPERFAMILY Protein kinase-like (PK-like) 865 1142 IPR011009 -
Lal21g0387 1210 Pfam Protein kinase domain 886 1137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0387 1210 Gene3D HUPs 428 578 IPR014729 -
Lal21g0387 1210 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1001 1013 IPR008271 GO:0004672|GO:0006468
Lal21g0387 1210 Gene3D Phosphorylase Kinase; domain 1 863 955 - -
Lal21g0387 1210 ProSiteProfiles Protein kinase domain profile. 883 1162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal21g0387 1210 Coils Coil 775 861 - -
Lal21g0387 1210 PANTHER OS02G0152300 PROTEIN 416 1195 - -
Lal21g0387 1210 CDD TryX_like_TryX_NRX 223 354 IPR045870 GO:0004791
Lal21g0387 1210 SUPERFAMILY Thioredoxin-like 66 173 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0387 Lal-Chr21 2630406 2640105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0387 412 1176 Receptor kinase-like Gene Family AT1G78940 57.490 0.0 801
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lal21g0387 Pkinase 8.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0387 - - gmx:100803461 1057.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0387 21 2630406 2640105 Lal21g0387 21 2630406 2640105 ECH
Lal21g0387 21 2630406 2640105 Lal4g0261 4 1686869 1697549 LSH