Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0382 ATGGTGATGGAGTTAATCCGTTTCTCCAAAACAGAAGAACAGAAAGCAATTCAAGAAGCAGCTTCTGAGGGCATTAACGGAATGAAAAATCTCATCAATCTCCTCTCTCACCAACCCTCTCTTTCTCATTCTCATTCCGATCTCACTCACTTCACTCTCTCTCAATTCAACAAACTCATCTCTTTACTCAACCGCACCGGCCATGCTCGTTTCCGCCGTGCTCCCCTTCACCAAACCTCCACCTCAGCCTCTCTCCCTCCACCACCACCGCCGCCGCCACACTTTCATACTCCAACGCCGACTCCGGTCATTAACCACGTCGTGGCTCCGACTCTGTCTCAGAGTTTGACTCTTGATTTCACAAAGCCTAATAACATTTTGAGTTCAAACGCTAAGTCCATGGACCTTGAGTTTTCAAAGGACACCACAACCTTCAGCGTTTCTTCAACCTCGTCTTTTATGTCCTCCGCTATTACCGGAGATGGCAGCGTTTCCAACGGGAAGCAAGGATCTTCGATTTTCATGACTCCGGCGGCCACTGCTATCTCCGGAGGAAAGCCGTTAATGTCCTTGGCGCCGTTCAAAAAGAGGTGCCATGACCACCGGGAACACTCTGGCGATGTCTCCGGCAATATCTCAGGTTCTGGAAGCAAGTGCCACTGCACCAAGAGTAGGAAAAATCGGGTGAAGAATACGGTTAGAGTTCCGGCGATAAGTTCTAAGGTCGCAGATATTCCGGCAGACGAGTATTCGTGGAGGAAATACGGTCAGAAACCGATAAAGGGGTCACCATATCCAAGGGGTTATTACAAGTGCAGTACAGTGCGAGGGTGTCCAGCTAGGAAACATGTGGAACGTGCCACAGACGATCCGGCTATGCTTATCGTGACGTACGAAGGGGAGCACCGTCACGAGATTCAAGCCGCGATGCAGGAGAACATTTCTGGGGAAATGGGTTTGGTATTCGAGTCAACGTAG 978 0.499 MVMELIRFSKTEEQKAIQEAASEGINGMKNLINLLSHQPSLSHSHSDLTHFTLSQFNKLISLLNRTGHARFRRAPLHQTSTSASLPPPPPPPPHFHTPTPTPVINHVVAPTLSQSLTLDFTKPNNILSSNAKSMDLEFSKDTTTFSVSSTSSFMSSAITGDGSVSNGKQGSSIFMTPAATAISGGKPLMSLAPFKKRCHDHREHSGDVSGNISGSGSKCHCTKSRKNRVKNTVRVPAISSKVADIPADEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERATDDPAMLIVTYEGEHRHEIQAAMQENISGEMGLVFEST 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0382 325 MobiDBLite consensus disorder prediction 82 97 - -
Lal21g0382 325 SUPERFAMILY WRKY DNA-binding domain 244 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal21g0382 325 MobiDBLite consensus disorder prediction 77 97 - -
Lal21g0382 325 MobiDBLite consensus disorder prediction 202 221 - -
Lal21g0382 325 Pfam WRKY DNA -binding domain 248 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal21g0382 325 SMART WRKY_cls 246 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal21g0382 325 PANTHER WRKY PROTEIN 11 323 - -
Lal21g0382 325 Gene3D WRKY domain 229 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal21g0382 325 ProSiteProfiles WRKY domain profile. 241 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal21g0382 325 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 11 323 IPR044810 GO:0003700
Lal21g0382 325 Pfam Plant zinc cluster domain 195 244 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0382 Lal-Chr21 2596691 2599834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0382 1 324 WRKY Transcription Factor Family AT2G24570 55.120 2.74e-108 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal21g0382 WRKY 4.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0382 - - gmx:100127394 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0382 21 2596691 2599834 Lal4g0258 4 1665013 1667365 LSH