Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0370 ATTGAAATATATATTTGTGGAAAAAGAAAAGAAAAAATGGGAGTGGATTATTACAATATATTACATGTGGAGAGAAATGCAACAGAGGATGATTTGAAGAAAGCATATAGAAAATTAGTGATGAAATGGCATCCTGATAAGAACCCTACAAATAAAAAAGAAGCTGAAGCCAATTTCAAGCATATTTCTGAGGCCTATGAGGTCCTTAGTGATCATGAGAAAAGGGCAATTTATGATCAACATGGAGAAGAAGGTTTGAAAGATAGGCCACCACCTGGTTCTGAACCAAGTGGTTTTAATCCAAGAAATGCAGAAGATATTTTTGCAGAATTCTTTGGAAGTAGCCCTTTTGGATTTGGTTCATCAGGACCAGGCAGGTCTATGAGGTTCCAATCTGATGGAGGAGCTGGAACATTTGGTGGATTTAATGCATCTGAAAATCTTTTTAGAACATATAGTGAAAGGCCTAATGTGCTAAAGAAGCCACCACCTGCTGAGAGCAAATTGCCTTGCAGTTTGGAAGAGTTGTACTCTGGATCTACTAGGAAAATGAAGATCTCAAGGACTGTCATGGATGCTAATGGCAGACAAGTTCTAGAAACAGAAATATTAACCATAGAGATAAAGCCGGGGTGGAAGAAAGGTACAAAGATAACATTCCCGGACAAAGGGAACCAGCAACCGAATCAACAGCCAGCAGACCTTGTATTTGTGATTGATGAGAAGCCTCATGATTTTTTCACTAGAGATGGTAATGACCTTATTATGAGTCAAAGGGTGTCACTAGCTGAGGCTATTAGTGGAACTACAATAAATATCACAACACTAAATAAACGTACTCTATCTATTCCACTAACTGATATTGTGAGCCCTGGTTTTGAGCTTGTTGTTGCAAAAGAAGGAATGCCAATAACAAAGGAGAGAGGTCATAGGGGTGACTTGAGGATCAAGTTTGAGGTTAAGTTCCCTACAAGATTGACACAAGAGCAAAAAGCAGGACTTAAGATAGCATTGGAAGGTTGA 1023 0.3871 IEIYICGKRKEKMGVDYYNILHVERNATEDDLKKAYRKLVMKWHPDKNPTNKKEAEANFKHISEAYEVLSDHEKRAIYDQHGEEGLKDRPPPGSEPSGFNPRNAEDIFAEFFGSSPFGFGSSGPGRSMRFQSDGGAGTFGGFNASENLFRTYSERPNVLKKPPPAESKLPCSLEELYSGSTRKMKISRTVMDANGRQVLETEILTIEIKPGWKKGTKITFPDKGNQQPNQQPADLVFVIDEKPHDFFTRDGNDLIMSQRVSLAEAISGTTINITTLNKRTLSIPLTDIVSPGFELVVAKEGMPITKERGHRGDLRIKFEVKFPTRLTQEQKAGLKIALEG 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0370 340 SUPERFAMILY Chaperone J-domain 15 123 IPR036869 -
Lal21g0370 340 CDD DnaJ 16 71 IPR001623 -
Lal21g0370 340 ProSitePatterns Nt-dnaJ domain signature. 59 78 IPR018253 -
Lal21g0370 340 SUPERFAMILY HSP40/DnaJ peptide-binding domain 166 245 IPR008971 GO:0006457|GO:0051082
Lal21g0370 340 SUPERFAMILY HSP40/DnaJ peptide-binding domain 246 332 IPR008971 GO:0006457|GO:0051082
Lal21g0370 340 SMART dnaj_3 15 74 IPR001623 -
Lal21g0370 340 Gene3D DnaJ domain 14 122 IPR036869 -
Lal21g0370 340 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 13 340 - -
Lal21g0370 340 Gene3D - 243 339 - -
Lal21g0370 340 PRINTS DnaJ domain signature 18 36 IPR001623 -
Lal21g0370 340 PRINTS DnaJ domain signature 36 51 IPR001623 -
Lal21g0370 340 PRINTS DnaJ domain signature 54 74 IPR001623 -
Lal21g0370 340 PRINTS DnaJ domain signature 74 93 IPR001623 -
Lal21g0370 340 CDD DnaJ_C 166 326 - -
Lal21g0370 340 Pfam DnaJ C terminal domain 166 323 IPR002939 -
Lal21g0370 340 ProSiteProfiles dnaJ domain profile. 16 82 IPR001623 -
Lal21g0370 340 Gene3D - 165 242 - -
Lal21g0370 340 Pfam DnaJ domain 16 79 IPR001623 -
Lal21g0370 340 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 13 340 - -
Lal21g0370 340 MobiDBLite consensus disorder prediction 82 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0370 Lal-Chr21 2508243 2510344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0370 17 81 C2H2 Transcription Factor Family AT1G74250 37.681 9.48e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0370 K09510 - egr:104437083 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0370 21 2508243 2510344 Lal21g0370 21 2508243 2510344 ECH