Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0356 ATGGCTCACCACCATAATCAAAATGCCAACAACAACAAAACTCAACAACAACAACAACACATAGTTTTACATGACTTTCTGGGCATGAAGAAATTTTCTGATTCTCCTCAAAACCCTCACCTTCCCCTTTCTGAACCTTCACCTTCTTCAGCATCACGTGGCCCCTTTTCCTCTTCTACCTCTGATATAGCTTCTGAAAAACAGGTAGGGAATCACCTTGAGGGAGTTCCATTCTATGGCCCAAGGAATGATTTTTCTAGCACTGAGATTAGTAACAGACTAGTGGGAAACAAGAGAAGTAATTCTGATTCTACTTTTATTGGTACATCTAGAGATGCCTCACAAATGGTCCCTGACTCTTTTCAGAGCTCACATTTGATGAAGATGCTCCGCAGCGTAGGCGGAGGAGGAGATCGGCTTAGAAGGCCAAATGATGATGAAGTGTTACTTGGGATGCAGTCAACAAAGCCAACTTTAGCTTCTCAGATATTCCAGCCTCTCACCAGCACTAAGGTTGATGCCAATAAATGGGAACGATCTATTCTCATGAATGCTGGCCCTTCCATGCAGCATCCACTGCGCGGTGGGCAATTGACACCTTTTGTCCACCAATTAGCTTCAAACAAGATCAGGGATGCCAATGCCGGACCTTCATTTATCTCTCAGTCAGGTCCTTCATTTATCTCTCAGTCAGCTGCTGACGAAGGATCTAGAACCGGAATTAAAGGCCCTGGAATTTTGAATTCTATAAACATGGCTGCTACCGCTACCGAGAAAATTTCATCTTCGATGCTGCTTGGTGGAAGCAGGCCAAAGCATGTAACTAATGTAATGGATCCAGAGTCTTCTACACCTCCAAGTCAGCAAGGGCTAACATCTGCCAGCCACCAGATGACTATTTTTTACGGAGGTCAAGCTCATGTTTTCGATGATGTCCACCCTCATAAGGCAGATGTTATAATGGCTTTAGCCGGGTCAAATGGTGGATCTTGGTCCACAGCATTCTCACCAAAATCTGCTGGAAAGCTGGTTAGTGATAGTAACTTGCACAGTGGAGAAAATGAAACTGGTATAGCAAGTAACGTGCCATTGCCACCGGAACTTCATGGGAGATTGTCTATCACTGGCAGTTCTAGCCATGCAATAGGGCCCGGTGATCGAGTATCAACTCCAGCAGGGGCAAACAAAGGAAGCATTGTAGCAAAAGAGACAAGAAAGCCTATTGAAGCAGCAGATCCCAGTTCTGAAGCCTGA 1254 0.4498 MAHHHNQNANNNKTQQQQQHIVLHDFLGMKKFSDSPQNPHLPLSEPSPSSASRGPFSSSTSDIASEKQVGNHLEGVPFYGPRNDFSSTEISNRLVGNKRSNSDSTFIGTSRDASQMVPDSFQSSHLMKMLRSVGGGGDRLRRPNDDEVLLGMQSTKPTLASQIFQPLTSTKVDANKWERSILMNAGPSMQHPLRGGQLTPFVHQLASNKIRDANAGPSFISQSGPSFISQSAADEGSRTGIKGPGILNSINMAATATEKISSSMLLGGSRPKHVTNVMDPESSTPPSQQGLTSASHQMTIFYGGQAHVFDDVHPHKADVIMALAGSNGGSWSTAFSPKSAGKLVSDSNLHSGENETGIASNVPLPPELHGRLSITGSSSHAIGPGDRVSTPAGANKGSIVAKETRKPIEAADPSSEA 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0356 417 MobiDBLite consensus disorder prediction 91 110 - -
Lal21g0356 417 SMART tify_2 291 326 IPR010399 -
Lal21g0356 417 MobiDBLite consensus disorder prediction 402 417 - -
Lal21g0356 417 MobiDBLite consensus disorder prediction 37 67 - -
Lal21g0356 417 ProSiteProfiles Tify domain profile. 291 326 IPR010399 -
Lal21g0356 417 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 52 416 IPR040390 -
Lal21g0356 417 Pfam tify domain 293 325 IPR010399 -
Lal21g0356 417 PANTHER PROTEIN TIFY 8 52 416 - -
Lal21g0356 417 MobiDBLite consensus disorder prediction 30 85 - -
Lal21g0356 417 MobiDBLite consensus disorder prediction 373 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0356 Lal-Chr21 2425539 2429891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0356 15 386 Tify Gene Family AT4G32570 35.606 3.19e-44 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lal21g0356 tify 3.1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0356 - - lang:109327803 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0250 17 1553185 1557163 Lal21g0356 21 2425539 2429891 LSH